RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 ZIM2Q9NZV7 527 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 USP36Q9P275 1121 aaKnown RBP6.07□□□□□ -1.44
NEDD9-202ENST00000379446 ENOPH1Q9UHY7 261 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 TPRKBQ9Y3C4 175 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 SAMHD1Q9Y3Z3 626 aaKnown RBP6.07□□□□□ -1.44
NEDD9-202ENST00000379446 MED13LQ71F56 2210 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 PCNTO95613 3336 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 WDR81Q562E7 1941 aa6.07□□□□□ -1.44
NEDD9-202ENST00000379446 MROH6A6NGR9 719 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 LRRC30A6NM36 301 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PSIP1O75475 530 aaKnown RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 EEDO75530 441 aaKnown RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 NAT2P11245 290 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 IGFBP5P24593 272 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 HTR1EP28566 365 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 HLCSP50747 726 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 ALDH3A2P51648 485 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 TMBIM6P55061 237 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PPP3R1P63098 170 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 INSM1Q01101 510 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 OXA1LQ15070 435 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 MED22Q15528 200 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 ELAVL1Q15717 326 aaKnown RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 SLC36A3Q495N2 470 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 NKAPLQ5M9Q1 402 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PDZK1Q5T2W1 519 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 MANEALQ5VSG8 457 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 LIPJQ5W064 366 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 BICRALQ6AI39 1079 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 OR9A2Q8NGT5 310 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF566Q969W8 418 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PERPQ96FX8 193 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 ORAI3Q9BRQ5 295 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 SORBS1Q9BX66 1292 aaKnown RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 MUC13Q9H3R2 512 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 SLC35C2Q9NQQ7 365 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 ASF1BQ9NVP2 202 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PLEK2Q9NYT0 353 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 DNAJC27Q9NZQ0 273 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 NUFIP1Q9UHK0 495 aaKnown RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 NPIPA5A0A0B4J1W7 369 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 B4E171 279 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 NPIPA7E9PJI5 369 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 ANKRD28O15084 1053 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 CXCL13O43927 109 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PLOD3O60568 738 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 MITFO75030 526 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 FGF4P08620 206 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 NPIPA8P0DM63 369 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 TSPAN7P41732 249 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 CLDN15P56746 228 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 CAMK2BQ13554 666 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 UGT3A2Q3SY77 523 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 NIPAL3Q6P499 406 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 ZNF551Q7Z340 670 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 ZDHHC21Q8IVQ6 265 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 BPIFB2Q8N4F0 458 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 FAM86B1Q8N7N1 296 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 KIAA1958Q8N8K9 716 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 SNAPC3Q92966 411 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PDP1Q9P0J1 537 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 VAPAQ9P0L0 249 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 TMEM9Q9P0T7 183 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 DNAJB9Q9UBS3 223 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 SLC23A2Q9UGH3 650 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 AP3M1Q9Y2T2 418 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 NPFFR2Q9Y5X5 522 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 NINQ8N4C6 2090 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 A0A1B0GTH9 108 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 LOC285095A0A1B0GVY8 99 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 ANTXRLA6NF34 631 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PRODHO43272 600 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 NME6O75414 186 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 OPN1SWP03999 348 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 ITGA5P08648 1049 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 RPS17P08708 135 aaKnown RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 HIST1H1TP22492 207 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PRKXP51817 358 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PMP22Q01453 160 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 MESP2Q0VG99 397 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 SNTB1Q13884 538 aaKnown RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 LRIF1Q5T3J3 769 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 FAHD2BQ6P2I3 314 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 Q71RC1 249 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 NLRC3Q7RTR2 1065 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 SLC16A14Q7RTX9 510 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 LIMS2Q7Z4I7 341 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 B3GNT7Q8NFL0 401 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 THEM6Q8WUY1 208 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 STON2Q8WXE9 905 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 FAHD2AQ96GK7 314 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 RBM4BQ9BQ04 359 aaKnown RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 RBM4Q9BWF3 364 aaKnown RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 MROQ9BYG7 248 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 MMP28Q9H239 520 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 LANCL2Q9NS86 450 aa6.06□□□□□ -1.44
NEDD9-202ENST00000379446 RYDENQ9NUL5 291 aaKnown RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PAK1IP1Q9NWT1 392 aaPredicted RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 PTBP2Q9UKA9 531 aaKnown RBP6.06□□□□□ -1.44
NEDD9-202ENST00000379446 POMT2Q9UKY4 750 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms