RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 SLC9B1P1A6NJY1 282 aa16.78■□□□□ 0.28
TDP2-202ENST00000378198 LANCL1O43813 399 aa16.78■□□□□ 0.28
TDP2-202ENST00000378198 FZD7O75084 574 aa16.78■□□□□ 0.28
TDP2-202ENST00000378198 KLF8O95600 359 aaPredicted RBP16.78■□□□□ 0.28
TDP2-202ENST00000378198 PAHP00439 452 aa16.78■□□□□ 0.28
TDP2-202ENST00000378198 SERPINA3P01011 423 aa16.78■□□□□ 0.28
TDP2-202ENST00000378198 GUSBP08236 651 aa16.78■□□□□ 0.28
TDP2-202ENST00000378198 RAB3BP20337 219 aa16.78■□□□□ 0.28
TDP2-202ENST00000378198 HNRNPA2B1P22626 353 aaKnown RBP16.78■□□□□ 0.28
TDP2-202ENST00000378198 ACVR1BP36896 505 aa16.78■□□□□ 0.28
TDP2-202ENST00000378198 SRP54P61011 504 aaKnown RBP16.78■□□□□ 0.28
TDP2-202ENST00000378198 MRPL28Q13084 256 aaKnown RBP16.78■□□□□ 0.28
TDP2-202ENST00000378198 FAM109BQ6ICB4 259 aaPredicted RBP16.78■□□□□ 0.28
TDP2-202ENST00000378198 CYB561A3Q8NBI2 242 aa16.78■□□□□ 0.28
TDP2-202ENST00000378198 C17orf47Q8NEP4 570 aa16.78■□□□□ 0.28
TDP2-202ENST00000378198 LRFN5Q96NI6 719 aa16.78■□□□□ 0.28
TDP2-202ENST00000378198 TMEM106CQ9BVX2 250 aa16.78■□□□□ 0.28
TDP2-202ENST00000378198 SYNDIG1LA6NDD5 238 aa16.77■□□□□ 0.28
TDP2-202ENST00000378198 CPNE3O75131 537 aaKnown RBP16.77■□□□□ 0.28
TDP2-202ENST00000378198 TFPIP10646 304 aa16.77■□□□□ 0.28
TDP2-202ENST00000378198 ZAR1Q86SH2 424 aa16.77■□□□□ 0.28
TDP2-202ENST00000378198 ANKRD9Q96BM1 317 aaPredicted RBP16.77■□□□□ 0.28
TDP2-202ENST00000378198 MCCC2Q9HCC0 563 aa16.77■□□□□ 0.28
TDP2-202ENST00000378198 KLHL1Q9NR64 748 aa16.77■□□□□ 0.28
TDP2-202ENST00000378198 SERTAD3Q9UJW9 196 aa16.77■□□□□ 0.28
TDP2-202ENST00000378198 FBXL4Q9UKA2 621 aa16.77■□□□□ 0.28
TDP2-202ENST00000378198 ARHGEF17Q96PE2 2063 aaPredicted RBP16.77■□□□□ 0.28
TDP2-202ENST00000378198 TRAV1-2A0A0B4J238 106 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 FAM221BA6H8Z2 402 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 CBX7O95931 251 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 DHFRP00374 187 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 PVRP15151 417 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 PYCR1P32322 319 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 ACAA2P42765 397 aaKnown RBP16.77■□□□□ 0.27
TDP2-202ENST00000378198 RAB38P57729 211 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 ANKRD54Q6NXT1 300 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 SHISA5Q8N114 240 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 ZNF614Q8N883 585 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 OR52R1Q8NGF1 315 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 OR5J2Q8NH18 312 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 GHSRQ92847 366 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 PTCHD1Q96NR3 888 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 LMAN2LQ9H0V9 348 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 EVA1BQ9NVM1 165 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 ST6GALNAC2Q9UJ37 374 aa16.77■□□□□ 0.27
TDP2-202ENST00000378198 A0A0J9YY10 115 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 OGG1O15527 345 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 EEF1E1O43324 174 aaKnown RBP16.76■□□□□ 0.27
TDP2-202ENST00000378198 ZNF780AO75290 641 aaPredicted RBP16.76■□□□□ 0.27
TDP2-202ENST00000378198 SLC35E2P0CK97 266 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 LSSP48449 732 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 GALK2Q01415 458 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 DBPQ10586 325 aaPredicted RBP16.76■□□□□ 0.27
TDP2-202ENST00000378198 SLC25A35Q3KQZ1 300 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 ALG10BQ5I7T1 473 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 RPTNQ6XPR3 784 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 CSNK1A1LQ8N752 337 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 LSMEM1Q8N8F7 131 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 DTX3Q8N9I9 347 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 ERMAPQ96PL5 475 aaPredicted RBP16.76■□□□□ 0.27
TDP2-202ENST00000378198 LMF2Q9BU23 707 aaKnown RBP16.76■□□□□ 0.27
TDP2-202ENST00000378198 ABRACLQ9P1F3 81 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 LAMA3Q16787 3333 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 GYPBP06028 91 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 EMDP50402 254 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 ACTA2P62736 377 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 ACTG2P63267 376 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 FHL1Q13642 323 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 ZNHIT3Q15649 155 aaPredicted RBP16.76■□□□□ 0.27
TDP2-202ENST00000378198 ALG11Q2TAA5 492 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 LINC00114Q6XXX2 140 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 SSX6Q7RTT6 188 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 C7orf61Q8IZ16 206 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 SYS1Q8N2H4 156 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 DNAJC5GQ8N7S2 189 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 DEDD2Q8WXF8 326 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 PEX11GQ96HA9 241 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 ABHD1Q96SE0 405 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 DPAGT1Q9H3H5 408 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.76■□□□□ 0.27
TDP2-202ENST00000378198 POT1Q9NUX5 634 aa16.76■□□□□ 0.27
TDP2-202ENST00000378198 DNAJB12Q9NXW2 375 aaKnown RBP16.76■□□□□ 0.27
TDP2-202ENST00000378198 OR2T7P0C7T2 308 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 PRKCAP17252 672 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 EVI2BP34910 448 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 BTCP35070 178 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 GBX2P52951 348 aaPredicted RBP16.75■□□□□ 0.27
TDP2-202ENST00000378198 YPEL5P62699 121 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 PITPNAQ00169 270 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 PSG6Q00889 435 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 CRYZQ08257 329 aaKnown RBP16.75■□□□□ 0.27
TDP2-202ENST00000378198 ILF3Q12906 894 aaKnown RBP eCLIP16.75■□□□□ 0.27
TDP2-202ENST00000378198 NTRK2Q16620 822 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 BTBD16Q32M84 506 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 POMGNT2Q8NAT1 580 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 OR52E2Q8NGJ4 325 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 OR2T27Q8NH04 317 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 SMAP2Q8WU79 429 aaPredicted RBP16.75■□□□□ 0.27
TDP2-202ENST00000378198 ARSGQ96EG1 525 aa16.75■□□□□ 0.27
TDP2-202ENST00000378198 HYLS1Q96M11 299 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms