RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 THSD1Q9NS62 852 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 C2orf42Q9NWW7 574 aa14.03□□□□□ -0.16
NPHP4-201ENST00000378156 BLACEA4D250 179 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 ARHGAP33O14559 1287 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 CD34P28906 385 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 PITPNBP48739 271 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 REEP5Q00765 189 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 EEF1A1P5Q5VTE0 462 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 SFRP4Q6FHJ7 346 aaPredicted RBP14.02□□□□□ -0.16
NPHP4-201ENST00000378156 UEVLDQ8IX04 471 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 ZNF595Q8IYB9 648 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 ELMOD3Q96FG2 381 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 CBLCQ9ULV8 474 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 BPNT1O95861 308 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 ACPPP15309 386 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 SFTPDP35247 375 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 CHRNEQ04844 493 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 GK2Q14410 553 aaPredicted RBP14.02□□□□□ -0.16
NPHP4-201ENST00000378156 KRBOX4Q5JUW0 171 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 METRNLQ641Q3 311 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 TMPPEQ6ZT21 453 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 C19orf47Q8N9M1 422 aaKnown RBP14.02□□□□□ -0.16
NPHP4-201ENST00000378156 ZSCAN4Q8NAM6 433 aaPredicted RBP14.02□□□□□ -0.16
NPHP4-201ENST00000378156 LILRB4Q8NHJ6 448 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 SPRYD4Q8WW59 207 aaPredicted RBP14.02□□□□□ -0.16
NPHP4-201ENST00000378156 ZMYND19Q96E35 227 aaPredicted RBP14.02□□□□□ -0.16
NPHP4-201ENST00000378156 PBX4Q9BYU1 374 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 DDX31Q9H8H2 851 aaKnown RBP14.02□□□□□ -0.16
NPHP4-201ENST00000378156 UBQLN4Q9NRR5 601 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 SLC7A11Q9UPY5 501 aa14.02□□□□□ -0.16
NPHP4-201ENST00000378156 SLC5A10A0PJK1 596 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 ANKRD28O15084 1053 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 RAD51DO75771 328 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 ZNF529Q6P280 563 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 SLC16A9Q7RTY1 509 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 CHTF18Q8WVB6 975 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 MBOAT4Q96T53 435 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 EGLN3Q9H6Z9 239 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 K7ESM1 405 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 TPMTP51580 245 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 MRPS10P82664 201 aaKnown RBP14.02□□□□□ -0.17
NPHP4-201ENST00000378156 TNFRSF17Q02223 184 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 ZNF616Q08AN1 781 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 RAB40BQ12829 278 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 RIN1Q13671 783 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 HACD4Q5VWC8 232 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 ELP2Q6IA86 826 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 SLC7A5P1Q8MH63 180 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 TCEAL3Q969E4 200 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 CNTNAP3BQ96NU0 1288 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 OR5M11Q96RB7 305 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 ZNF436Q9C0F3 470 aaPredicted RBP14.02□□□□□ -0.17
NPHP4-201ENST00000378156 FGF22Q9HCT0 170 aa14.02□□□□□ -0.17
NPHP4-201ENST00000378156 A0A1W2PQ09 198 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 TFP02787 698 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 LIPAP38571 399 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 CSNK1G2P78368 415 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 Q6ZNX1 250 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 MEIOCA2RUB1 952 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 FAM171A2A8MVW0 826 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 SSX5O60225 188 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 AFF3P51826 1226 aaKnown RBP14.01□□□□□ -0.17
NPHP4-201ENST00000378156 ENTPD8Q5MY95 495 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 C3orf33Q6P1S2 294 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 OLIG3Q7RTU3 272 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 OR13H1Q8NG92 308 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 HAVCR2Q8TDQ0 301 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 FAM46BQ96A09 425 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 LMF2Q9BU23 707 aaKnown RBP14.01□□□□□ -0.17
NPHP4-201ENST00000378156 MBNL1Q9NR56 388 aaKnown RBP14.01□□□□□ -0.17
NPHP4-201ENST00000378156 GJE1A6NN92 205 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 CER1O95813 267 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 CTGFP29279 349 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 GNRHRP30968 328 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 RAB38P57729 211 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 ARL6IP1Q15041 203 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 SYT6Q5T7P8 510 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-201ENST00000378156 OR4F15Q8NGB8 312 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 SNAPC3Q92966 411 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 C16orf58Q96GQ5 468 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 ARID1BQ8NFD5 2236 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-201ENST00000378156 CD3GP09693 182 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 CAMLGP49069 296 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 FAM69AQ5T7M9 428 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 SLC46A3Q7Z3Q1 461 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 OR51Q1Q8NH59 317 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 ENY2Q9NPA8 101 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 ZNF443Q9Y2A4 671 aaPredicted RBP14.01□□□□□ -0.17
NPHP4-201ENST00000378156 HS3ST3A1Q9Y663 406 aa14.01□□□□□ -0.17
NPHP4-201ENST00000378156 PRKRAO75569 313 aaKnown RBP14□□□□□ -0.17
NPHP4-201ENST00000378156 HSD11B2P80365 405 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 CYHR1Q6ZMK1 362 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 BEST4Q8NFU0 473 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 SLC7A13Q8TCU3 470 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 C1QTNF2Q9BXJ5 285 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 OR52D1Q9H346 318 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 A6NIN4 97 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 ACOT7O00154 380 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 TNFRSF10CO14798 259 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 LUMP51884 338 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms