RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 ERP29P30040 261 aaKnown RBP10.08□□□□□ -0.8
BEST1-201ENST00000378043 PBX2P40425 430 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 PPP1CAP62136 330 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 SRSF5Q13243 272 aaKnown RBP10.08□□□□□ -0.8
BEST1-201ENST00000378043 GPALPP1Q8IXQ4 340 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 GPR135Q8IZ08 494 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 C7orf61Q8IZ16 206 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 CA13Q8N1Q1 262 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 OR4N2Q8NGD1 307 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 OR4C6Q8NH72 309 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 SIPA1Q96FS4 1042 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 TTTY10Q9BZA0 68 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 HDHD2Q9H0R4 259 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 CCDC86Q9H6F5 360 aaKnown RBP10.08□□□□□ -0.8
BEST1-201ENST00000378043 SLC28A3Q9HAS3 691 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 CAPN10Q9HC96 672 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 TRPV5Q9NQA5 729 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 HAO2Q9NYQ3 351 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 GON4LQ3T8J9 2241 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 EPOPA6NHQ4 379 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 RIIAD1A6NNX1 92 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 ORC5O43913 435 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 NKX2-2O95096 273 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 APBB3O95704 486 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 C1QBP02746 253 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 S1PR1P21453 382 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 PYCR1P32322 319 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 PITPNBP48739 271 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 INPP1P49441 399 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 SRP54P61011 504 aaKnown RBP10.08□□□□□ -0.8
BEST1-201ENST00000378043 TNK1Q13470 666 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 CCDC85BQ15834 202 aaPredicted RBP10.08□□□□□ -0.8
BEST1-201ENST00000378043 LAMTOR1Q6IAA8 161 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 SYT9Q86SS6 491 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 ARL14Q8N4G2 192 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 DNAJC5GQ8N7S2 189 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 OR52R1Q8NGF1 315 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 HSD17B8Q92506 261 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 GHSRQ92847 366 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 RERGQ96A58 199 aaPredicted RBP10.08□□□□□ -0.8
BEST1-201ENST00000378043 CREB3L1Q96BA8 519 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 MRGPRX1Q96LB2 322 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 ZNF559Q9BR84 538 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 DZANK1Q9NVP4 752 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 ST6GALNAC2Q9UJ37 374 aa10.08□□□□□ -0.8
BEST1-201ENST00000378043 TFP02787 698 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 RBMS1P29558 406 aaKnown RBP10.07□□□□□ -0.8
BEST1-201ENST00000378043 FAM53BQ14153 422 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 ACSM3Q53FZ2 586 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 RNF44Q7L0R7 432 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 TPRA1Q86W33 373 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 SLC44A3Q8N4M1 653 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 OR5H6Q8NGV6 325 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 RSC1A1Q92681 617 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 RFT1Q96AA3 541 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 PBX4Q9BYU1 374 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 ABCG5Q9H222 651 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 NIPAL2Q9H841 368 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 TMEM27Q9HBJ8 222 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 DNAJB12Q9NXW2 375 aaKnown RBP10.07□□□□□ -0.8
BEST1-201ENST00000378043 TP53BP1Q12888 1972 aaPredicted RBP10.07□□□□□ -0.8
BEST1-201ENST00000378043 CEP290O15078 2479 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 AKR7A2O43488 359 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 CPNE3O75131 537 aaKnown RBP10.07□□□□□ -0.8
BEST1-201ENST00000378043 AK1P00568 194 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 ZNF3P17036 446 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 PRKCAP17252 672 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 AHCYP23526 432 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 SRP9P49458 86 aaKnown RBP10.07□□□□□ -0.8
BEST1-201ENST00000378043 ATP12AP54707 1039 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 SLC36A2Q495M3 483 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 SDE2Q6IQ49 451 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 LINC00114Q6XXX2 140 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 RTL4Q6ZR62 310 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 ZNF614Q8N883 585 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 OR4D9Q8NGE8 314 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 TRMT10AQ8TBZ6 339 aaKnown RBP10.07□□□□□ -0.8
BEST1-201ENST00000378043 PMM1Q92871 262 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 TMEM106CQ9BVX2 250 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 WBP1LQ9NX94 342 aa10.07□□□□□ -0.8
BEST1-201ENST00000378043 A0A0B4J203 849 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 A0A1W2PPK0 400 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 HRKO00198 91 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 TNFRSF10CO14798 259 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 EEF1E1O43324 174 aaKnown RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 FZD7O75084 574 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 SOX30O94993 753 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 HK1P19367 917 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 HNRNPA2B1P22626 353 aaKnown RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 TALDO1P37837 337 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 NRG3P56975 720 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 TRAM1Q15629 374 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 CEP78Q5JTW2 689 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 THOC7Q6I9Y2 204 aaKnown RBP10.06□□□□□ -0.8
BEST1-201ENST00000378043 GRAMD2AQ8IUY3 354 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 CSNK1A1LQ8N752 337 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 FRMD1Q8N878 549 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 OR51L1Q8NGJ5 315 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 SLC2A12Q8TD20 617 aa10.06□□□□□ -0.8
BEST1-201ENST00000378043 ZNRF4Q8WWF5 429 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms