RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 LIPIQ6XZB0 460 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 GPR26Q8NDV2 337 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 FGF14Q92915 247 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CHRDL1Q9BU40 450 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 NKX6-2Q9C056 277 aaPredicted RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 B3GAT1Q9P2W7 334 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 RANP62826 216 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 MAFIPQ8WZ33 124 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 NAT6Q93015 286 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ATP13A2Q9NQ11 1180 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 SGCEO43556 437 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PTPN6P29350 595 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 NETO2Q8NC67 525 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 A8MVM7 634 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 B4DXG7 233 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CPNE3O75131 537 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PEX11BO96011 259 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 EFNA3P52797 238 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 H3F3AP84243 136 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PLPP4Q5VZY2 271 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 MTFMTQ96DP5 389 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 NUDT9Q9BW91 350 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 OGG1O15527 345 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF84P51523 738 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 OR6K3Q8NGY3 331 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 SMIM4Q8WVI0 70 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 NDRG3Q9UGV2 375 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 FAM74A7A6NL05 159 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CTDSP2O14595 271 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 BEX3Q00994 111 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 CLLU1OSQ5K130 101 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ZC3H14Q6PJT7 736 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 RAB11FIP2Q7L804 512 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 MORN4Q8NDC4 146 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 NDUFS4O43181 175 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ALDOCP09972 364 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PRKACGP22612 351 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 NKPD1Q17RQ9 610 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 LILRB1Q8NHL6 650 aaPredicted RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 GTF2A1LQ9UNN4 478 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 F5H0A9 414 aaPredicted RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 OLFM2O95897 454 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 SOD1P00441 154 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 HOXD9P28356 352 aaPredicted RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PMELP40967 661 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 RAB30Q15771 203 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 ARSKQ6UWY0 536 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 LIPHQ8WWY8 451 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PAPOLGQ9BWT3 736 aaKnown RBP4.61□□□□□ -1.67
PCDH9-201ENST00000377861 GPR62Q9BZJ7 368 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 OR2A4O95047 310 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PLP2Q04941 152 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PIK3IP1Q96FE7 263 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 OR2A7Q96R45 310 aa4.61□□□□□ -1.67
PCDH9-201ENST00000377861 PEAK1Q9H792 1746 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 DOK2O60496 412 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 IFNA2P01563 188 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 NCK1P16333 377 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 PNRC1Q12796 327 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-201ENST00000377861 ARSIQ5FYB1 569 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 TEX30Q5JUR7 227 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 GRASPQ7Z6J2 395 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-201ENST00000377861 VRK2Q86Y07 508 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 KLBQ86Z14 1044 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 NFKBIDQ8NI38 313 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 GLIS2Q9BZE0 524 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-201ENST00000377861 SLC6A20Q9NP91 592 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 EXTL2Q9UBQ6 330 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 KIR2DS1A0A191URI9 304 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 ARSBP15848 533 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 TIMP2P16035 220 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 KIR2DS4P43632 304 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 KIR2DS1Q14954 304 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 RAB3DO95716 219 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 CSTAP01040 98 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 NRARPQ7Z6K4 114 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 GALNT16Q8N428 558 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 ZSCAN4Q8NAM6 433 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-201ENST00000377861 OR9A2Q8NGT5 310 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 IGSF8Q969P0 613 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 GJD2Q9UKL4 321 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 GPSM3Q9Y4H4 160 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 KPTNQ9Y664 436 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 HCKP08631 526 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 C19orf35Q6ZS72 473 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 MED25Q71SY5 747 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 RPUSD4Q96CM3 377 aaKnown RBP4.6□□□□□ -1.67
PCDH9-201ENST00000377861 C3orf30Q96M34 536 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 C6orf47O95873 294 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 DNASE1L3Q13609 305 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 CHRFAM7AQ494W8 412 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 SCGB1C1Q8TD33 95 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM19Q96HH6 336 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 TFPIP10646 304 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 HLA-GP17693 338 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF41P51814 821 aaPredicted RBP4.6□□□□□ -1.67
PCDH9-201ENST00000377861 IL13RA1P78552 427 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 OR52W1Q6IF63 320 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 OR9I1Q8NGQ6 314 aa4.6□□□□□ -1.67
PCDH9-201ENST00000377861 FBRSL1Q9HCM7 1045 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms