RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 MUTYHQ9UIF7 546 aa13.44□□□□□ -0.26
TCOF1-202ENST00000377797 SPINT1O43278 529 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 PRKNO60260 465 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-202ENST00000377797 IL33O95760 270 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 PTHP01270 115 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 CHAF1BQ13112 559 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 ZNF227Q86WZ6 799 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 SLC35F2Q8IXU6 374 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 PNLDC1Q8NA58 520 aaKnown RBP13.43□□□□□ -0.26
TCOF1-202ENST00000377797 GINS4Q9BRT9 223 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 MED28Q9H204 178 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 ENAMQ9NRM1 1142 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 ZNF221Q9UK13 617 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 NDRG4Q9ULP0 352 aaKnown RBP13.43□□□□□ -0.26
TCOF1-202ENST00000377797 IDSB3KWA1 339 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 ALOX12BO75342 701 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 KCNK2O95069 426 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 SYNGR4O95473 234 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 OPRL1P41146 370 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 ZFP69Q49AA0 526 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 DHRS4L2Q6PKH6 230 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 PRSS41Q7RTY9 318 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 OR13F1Q8NGS4 319 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 C16orf52Q8NHV5 167 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 C17orf50Q8WW18 174 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 ATP13A2Q9NQ11 1180 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 COMMD9Q9P000 198 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 A0A087WV62 115 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 AGAP5A6NIR3 686 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 LILRB5O75023 590 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 FARS2O95363 451 aaKnown RBP13.43□□□□□ -0.26
TCOF1-202ENST00000377797 EFEMP2O95967 443 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 GSTT2BP0CG30 244 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 CCNOP22674 350 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 ZNF84P51523 738 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 ADAM8P78325 824 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 ZNF425Q6IV72 752 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 SLC18B1Q6NT16 456 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 DTX3Q8N9I9 347 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 MVB12AQ96EY5 273 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 S100A16Q96FQ6 103 aaKnown RBP13.43□□□□□ -0.26
TCOF1-202ENST00000377797 TSPAN5P62079 268 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 GALK2Q01415 458 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 KLHL15Q96M94 604 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 UBQLN3Q9H347 655 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 GPN1Q9HCN4 374 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-202ENST00000377797 SLAMF7Q9NQ25 335 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 POLE4Q9NR33 117 aa13.43□□□□□ -0.26
TCOF1-202ENST00000377797 SULT2B1O00204 365 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 CD63P08962 238 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 EPHA2P29317 976 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 AQP2P41181 271 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 PPP1CAP62136 330 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 PRAMEF20Q5VT98 475 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 TMPRSS12Q86WS5 348 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 RNASE11Q8TAA1 199 aaKnown RBP13.42□□□□□ -0.26
TCOF1-202ENST00000377797 SFXN2Q96NB2 322 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 PHOX2BQ99453 314 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 NXT1Q9UKK6 140 aaKnown RBP13.42□□□□□ -0.26
TCOF1-202ENST00000377797 PADI1Q9ULC6 663 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 PDCD11Q14690 1871 aaKnown RBP13.42□□□□□ -0.26
TCOF1-202ENST00000377797 CHP2O43745 196 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 PIP5K1CO60331 668 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 TBX19O60806 448 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 CYB5AP00167 134 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 HCKP08631 526 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 IGFBP1P08833 259 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-202ENST00000377797 HTR3AP46098 478 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 ALDH3B2P48448 385 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 DUSP8Q13202 625 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 ARFRP1Q13795 201 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 CRMP1Q14194 572 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 CTU2Q2VPK5 515 aaKnown RBP13.42□□□□□ -0.26
TCOF1-202ENST00000377797 LSM14AQ8ND56 463 aaKnown RBP13.42□□□□□ -0.26
TCOF1-202ENST00000377797 PMM1Q92871 262 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 ZNF717Q9BY31 904 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-202ENST00000377797 SLC38A1Q9H2H9 487 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 MED17Q9NVC6 651 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 RBM7Q9Y580 266 aaKnown RBP13.42□□□□□ -0.26
TCOF1-202ENST00000377797 KCNE3Q9Y6H6 103 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 GOLGB1Q14789 3259 aaKnown RBP13.42□□□□□ -0.26
TCOF1-202ENST00000377797 SIP14410 1827 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 FCER2P06734 321 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 ZNF28P17035 718 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 NDUFA5Q16718 116 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 OR5W2Q8NH69 310 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 IFI44Q8TCB0 444 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 TNFAIP8L1Q8WVP5 186 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 PITX2Q99697 317 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 IFT46Q9NQC8 304 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 ERVK13-1Q9NX77 482 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 PRKYO43930 277 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 CHRNB1P11230 501 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 PRKXP51817 358 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 SPCS2Q15005 226 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 SLC2A12Q8TD20 617 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 ZNF582Q96NG8 517 aaPredicted RBP13.42□□□□□ -0.26
TCOF1-202ENST00000377797 C2orf42Q9NWW7 574 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 DOCK6Q96HP0 2047 aa13.42□□□□□ -0.26
TCOF1-202ENST00000377797 TEX13CA0A0J9YWL9 993 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms