RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 GRINAQ7Z429 371 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 STON2Q8WXE9 905 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 NRGNQ92686 78 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 GTF2H4Q92759 462 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 AURKBQ96GD4 344 aaPredicted RBP15.02■□□□□ -0
HMGN4-201ENST00000377575 TMEM45AQ9NWC5 275 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 CHRNA9Q9UGM1 479 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 ST6GALNAC2Q9UJ37 374 aa15.02■□□□□ -0
HMGN4-201ENST00000377575 AKAP6Q13023 2319 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 ABCA4P78363 2273 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 DSPPQ9NZW4 1301 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 A0A096LPI6 279 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 A0A1W2PNR3 127 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 CLDN24A6NM45 220 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 NR5A2O00482 541 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 PRKD3O94806 890 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 FKBP2P26885 142 aaKnown RBP15.01□□□□□ -0.01
HMGN4-201ENST00000377575 HTR3AP46098 478 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 ATP4BP51164 291 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 FADDQ13158 208 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 SQLEQ14534 574 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 MRPL2Q5T653 305 aaKnown RBP15.01□□□□□ -0.01
HMGN4-201ENST00000377575 SLC2A7Q6PXP3 512 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 ZNF440Q8IYI8 595 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 CNOT9Q92600 299 aaKnown RBP15.01□□□□□ -0.01
HMGN4-201ENST00000377575 SPDL1Q96EA4 605 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 CCDC106Q9BWC9 280 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 KLHL4Q9C0H6 718 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 PAIP1Q9H074 479 aaKnown RBP15.01□□□□□ -0.01
HMGN4-201ENST00000377575 C12orf49Q9H741 205 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 KLHL28Q9NXS3 571 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 CCDC167Q9P0B6 97 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 KLHL9Q9P2J3 617 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 PCDHB14Q9Y5E9 798 aa15.01□□□□□ -0.01
HMGN4-201ENST00000377575 HRGP04196 525 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 TFPIP10646 304 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 PPP3CBP16298 524 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 ENPP1P22413 925 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 IDH2P48735 452 aaKnown RBP15□□□□□ -0.01
HMGN4-201ENST00000377575 DIO1P49895 249 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 PLAURQ03405 335 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 BLOC1S3Q6QNY0 202 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 PAMR1Q6UXH9 720 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 SLC38A5Q8WUX1 472 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 ZHX1-C8orf76Q96EF9 292 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 WFIKKN1Q96NZ8 548 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 SIKE1Q9BRV8 207 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 RABEP2Q9H5N1 569 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 CTPS2Q9NRF8 586 aa15□□□□□ -0.01
HMGN4-201ENST00000377575 IGHV3-15A0A0B4J1V0 119 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 CFAP73A6NFT4 308 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 SULT2B1O00204 365 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 CLIC1O00299 241 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 FAAHO00519 579 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 SASH3O75995 380 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 YES1P07947 543 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 TFPTP0C1Z6 253 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 CD1EP15812 388 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 CRYGSP22914 178 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 PPIBP23284 216 aaKnown RBP14.99□□□□□ -0.01
HMGN4-201ENST00000377575 DNASE1P24855 282 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 POLR2HP52434 150 aaKnown RBP14.99□□□□□ -0.01
HMGN4-201ENST00000377575 ART1P52961 327 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 LARS2Q15031 903 aaKnown RBP14.99□□□□□ -0.01
HMGN4-201ENST00000377575 POU4F3Q15319 338 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 RGNQ15493 299 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 TESK1Q15569 626 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 MAPK11Q15759 364 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 ZSWIM7Q19AV6 140 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 LRIF1Q5T3J3 769 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 TMPPEQ6ZT21 453 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 ZNF550Q7Z398 422 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 FUNDC1Q8IVP5 155 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 TUSC5Q8IXB3 177 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 OR52P1PQ8NH57 321 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 TMEM19Q96HH6 336 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 ARMC7Q9H6L4 198 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 BCO1Q9HAY6 547 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 TRIM33Q9UPN9 1127 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 ZNF443Q9Y2A4 671 aaPredicted RBP14.99□□□□□ -0.01
HMGN4-201ENST00000377575 HDGFL3Q9Y3E1 203 aa14.99□□□□□ -0.01
HMGN4-201ENST00000377575 A0A0G2JPF8 293 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 CDHR4A6H8M9 788 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 HNRNPCL2B2RXH8 293 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 HNRNPCL3B7ZW38 293 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 AP3D1O14617 1153 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 SMAD9O15198 467 aaKnown RBP14.98□□□□□ -0.01
HMGN4-201ENST00000377575 CYTIPO60759 359 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 HNRNPCL1O60812 293 aaKnown RBP14.98□□□□□ -0.01
HMGN4-201ENST00000377575 ADAM11O75078 769 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 PMS2P2O95744 297 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 FESP07332 822 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 THBS1P07996 1170 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 HNRNPCL4P0DMR1 293 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 HOXB9P17482 250 aaPredicted RBP14.98□□□□□ -0.01
HMGN4-201ENST00000377575 CLK1P49759 484 aaKnown RBP14.98□□□□□ -0.01
HMGN4-201ENST00000377575 IST1P53990 364 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 RASGEF1BQ0VAM2 473 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 EPS8Q12929 822 aa14.98□□□□□ -0.01
HMGN4-201ENST00000377575 AGKQ53H12 422 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms