RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 FAM47E-STBD1D6RA91 191 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 H0YHG0 523 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 CHP2O43745 196 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 TRAPPC6AO75865 159 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 WISP2O76076 250 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 CST1P01037 141 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 IL11P20809 199 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 SPIBQ01892 262 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 MERTKQ12866 999 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 CMPK2Q5EBM0 449 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 WIPI1Q5MNZ9 446 aaPredicted RBP19.27■□□□□ 0.67
CBWD3-202ENST00000377342 SWT1Q5T5J6 900 aaKnown RBP19.27■□□□□ 0.67
CBWD3-202ENST00000377342 OR2T5Q6IEZ7 315 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 ULK3Q6PHR2 472 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 C10orf67Q8IYJ2 551 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 OR2T29Q8NH02 315 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 WBP1Q96G27 269 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 TSPAN10Q9H1Z9 355 aaPredicted RBP19.27■□□□□ 0.67
CBWD3-202ENST00000377342 SLC6A15Q9H2J7 730 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 YY1AP1Q9H869 796 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 RPS6KB2Q9UBS0 482 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 PRDM4Q9UKN5 801 aa19.27■□□□□ 0.67
CBWD3-202ENST00000377342 OR2M5A3KFT3 312 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 TFECO14948 347 aaPredicted RBP19.26■□□□□ 0.67
CBWD3-202ENST00000377342 HNRNPRO43390 633 aaKnown RBP19.26■□□□□ 0.67
CBWD3-202ENST00000377342 EFNA2O43921 213 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 SFTPCP11686 197 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 ZNF17P17021 662 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 KLRB1Q12918 225 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 ATP6AP1Q15904 470 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 RAET1LQ5VY80 246 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 NKAIN4Q8IVV8 208 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 TEX19Q8NA77 164 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 OR14L1PQ8NHC6 308 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 DNAJA4Q8WW22 397 aaPredicted RBP19.26■□□□□ 0.67
CBWD3-202ENST00000377342 NR4A3Q92570 626 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 SLC38A4Q969I6 547 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 FUZQ9BT04 418 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 ZNF426Q9BUY5 554 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 FNDC11Q9BVV2 318 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 NTN4Q9HB63 628 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 SVILO95425 2214 aa19.26■□□□□ 0.67
CBWD3-202ENST00000377342 KALRNO60229 2985 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 H1F0P07305 194 aaKnown RBP19.25■□□□□ 0.67
CBWD3-202ENST00000377342 THRBP10828 461 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 PTNP21246 168 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 LIMS1P48059 325 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 POLR2HP52434 150 aaKnown RBP19.25■□□□□ 0.67
CBWD3-202ENST00000377342 ST3GAL3Q11203 375 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 RCN1Q15293 331 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 GLYR1Q49A26 553 aaPredicted RBP19.25■□□□□ 0.67
CBWD3-202ENST00000377342 POMZP3Q6PJE2 187 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 LINC00114Q6XXX2 140 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 ADGRG3Q86Y34 549 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 PKP2Q99959 881 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 C12orf10Q9HB07 376 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 ACKR4Q9NPB9 350 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 DNAJB9Q9UBS3 223 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 LYVE1Q9Y5Y7 322 aa19.25■□□□□ 0.67
CBWD3-202ENST00000377342 IGKV1D-42A0A075B6H8 117 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 TMED7-TICAM2A0A0A6YYA0 188 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 TRBV4-1A0A0J9YWV2 114 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 A0A1W2PRQ8 180 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 H0Y3Z8 333 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 ADAMDEC1O15204 470 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 CLOCKO15516 846 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 FCGR1AP12314 374 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 ADH6P28332 368 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 EIF1P41567 113 aaKnown RBP19.24■□□□□ 0.67
CBWD3-202ENST00000377342 IST1P53990 364 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 GFRA1P56159 465 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 LSM11P83369 360 aaKnown RBP eCLIP19.24■□□□□ 0.67
CBWD3-202ENST00000377342 FOXD4Q12950 439 aaPredicted RBP19.24■□□□□ 0.67
CBWD3-202ENST00000377342 PPP1R8Q12972 351 aaKnown RBP19.24■□□□□ 0.67
CBWD3-202ENST00000377342 DGCR6Q14129 220 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 TRILQ7L0X0 811 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 OR4C15Q8NGM1 316 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 DTNBP1Q96EV8 351 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 TMED7Q9Y3B3 224 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 A0A087WUJ7 227 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 GADD45GO95257 159 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 FASP25445 335 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 ELK4P28324 431 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 HTR3AP46098 478 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 TRAM2Q15035 370 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 SEC23BQ15437 767 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 PRR30Q53SZ7 412 aaPredicted RBP19.24■□□□□ 0.67
CBWD3-202ENST00000377342 AMIGO2Q86SJ2 522 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 OR52J3Q8NH60 311 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 SLC7A13Q8TCU3 470 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 TMEM255BQ8WV15 326 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 DEFB127Q9H1M4 99 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 ANKRD19PQ9H560 264 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 SLC6A5Q9Y345 797 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 U3KQV3 271 aa19.24■□□□□ 0.67
CBWD3-202ENST00000377342 KIAA1549Q9HCM3 1950 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 TMEM72A0PK05 275 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 MGRN1O60291 552 aa19.23■□□□□ 0.67
CBWD3-202ENST00000377342 DEAF1O75398 565 aaPredicted RBP19.23■□□□□ 0.67
CBWD3-202ENST00000377342 LDLRP01130 860 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms