RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CLEC14AQ86T13 490 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 CDCP1Q9H5V8 836 aa12.71□□□□□ -0.38
GPC6-201ENST00000377047 RANBP3Q9H6Z4 567 aaPredicted RBP12.71□□□□□ -0.38
GPC6-201ENST00000377047 SHISA7A6NL88 538 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 TIMM8AO60220 97 aaPredicted RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 EIF2DP41214 584 aaKnown RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 PROX2Q3B8N5 592 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 GPR157Q5UAW9 335 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 C22orf15Q8WYQ4 148 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 ZNF566Q969W8 418 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 LCORQ96JN0 433 aaPredicted RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 EBF1Q9UH73 591 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 CNOT11Q9UKZ1 510 aaKnown RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 H0Y8X5 98 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 ARSBP15848 533 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 SERPINA2P20848 420 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 DPP4P27487 766 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 KEAP1Q14145 624 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 ZNF322Q6U7Q0 402 aaPredicted RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 MRPL41Q8IXM3 137 aaKnown RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 FBXO27Q8NI29 283 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 FOXQ1Q9C009 403 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 MAB21L2Q9Y586 359 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 PCDHGA8Q9Y5G5 932 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 TMEM269A0A1B0GVZ9 245 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 TRAPPC2LH3BP13 241 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 FANCGO15287 622 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 SNAPC5O75971 98 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 CBX7O95931 251 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 EDN3P14138 238 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 SEC61A1P61619 476 aaKnown RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 CDK5R2Q13319 367 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 LILRA3Q8N6C8 439 aaPredicted RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 SUN5Q8TC36 379 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 MICU1Q9BPX6 476 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 EIF5A2Q9GZV4 153 aaKnown RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 QRSL1Q9H0R6 528 aaKnown RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 H0YIV9 168 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 I3L521 148 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 CARD18P57730 90 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 CAMK2DQ13557 499 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 GGTA1PQ4G0N0 100 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 SLC22A6Q4U2R8 563 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 MISPQ8IVT2 679 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 MKXQ8IYA7 352 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 OR13C2Q8NGS9 318 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 HAVCR2Q8TDQ0 301 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 HCRTR1O43613 425 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 CD40LGP29965 261 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 KIAA1024LP59773 190 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 C6orf15Q6UXA7 325 aaPredicted RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 SLCO4C1Q6ZQN7 724 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 MED25Q71SY5 747 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 MEPCEQ7L2J0 689 aaKnown RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 KIAA0907Q7Z7F0 614 aaPredicted RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 B3GNT7Q8NFL0 401 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 OR1E3Q8WZA6 343 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 DHRS4Q9BTZ2 278 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 LHPPQ9H008 270 aa12.7□□□□□ -0.38
GPC6-201ENST00000377047 MRPS2Q9Y399 296 aaKnown RBP12.7□□□□□ -0.38
GPC6-201ENST00000377047 A0A1B0GV50 99 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 SERINC4A6NH21 518 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 KLRC4-KLRK1H3BQV0 150 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 K7ESM1 405 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 ETV5P41161 510 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 FGL1Q08830 312 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 PGGHGQ32M88 737 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 BCL7AQ4VC05 210 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 SLC22A10Q63ZE4 541 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 RSPO2Q6UXX9 243 aaPredicted RBP12.69□□□□□ -0.38
GPC6-201ENST00000377047 FAM83HQ6ZRV2 1179 aaPredicted RBP12.69□□□□□ -0.38
GPC6-201ENST00000377047 WASH6PQ9NQA3 447 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 PRDM9Q9NQV7 894 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 LOC105369274A0A096LPK9 316 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 A0A1B0GX78 115 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 MEIS3P1A6NDR6 274 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 GOSR2O14653 212 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 LINC01565O15544 149 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 IFNA1P01562 189 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 BCL6P41182 706 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 OR7E24Q6IFN5 339 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 KIAA1211LQ6NV74 962 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 OR4N4Q8N0Y3 316 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.69□□□□□ -0.38
GPC6-201ENST00000377047 SLC37A2Q8TED4 501 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 THOC3Q96J01 351 aaKnown RBP12.69□□□□□ -0.38
GPC6-201ENST00000377047 PIGQQ9BRB3 760 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 MED16Q9Y2X0 877 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 TOGARAM1Q9Y4F4 1720 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 A0A1W2PQL4 384 aaPredicted RBP12.69□□□□□ -0.38
GPC6-201ENST00000377047 B8ZZF3 427 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 DENRO43583 198 aaKnown RBP12.69□□□□□ -0.38
GPC6-201ENST00000377047 ALOX12BO75342 701 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 ATP1B3P54709 279 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 SLC35A1P78382 337 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 C17orf67Q0P5P2 114 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 TEX19Q8NA77 164 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 ITFG2Q969R8 447 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 AMDHD1Q96NU7 426 aa12.69□□□□□ -0.38
GPC6-201ENST00000377047 GORASP2Q9H8Y8 452 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms