RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 V9GYH0 126 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 VCANP13611 3396 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 EFCAB7A8K855 629 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 PRKNO60260 465 aaPredicted RBP18.59■□□□□ 0.57
VSX1-202ENST00000376709 PIAS2O75928 621 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 PEPDP12955 493 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 GALNSP34059 522 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 OR1D4P47884 311 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 OR1D5P58170 312 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 ZP2Q05996 745 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 BIKQ13323 160 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.59■□□□□ 0.57
VSX1-202ENST00000376709 ARHGAP11AQ6P4F7 1023 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 LINC00114Q6XXX2 140 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 CLDN23Q96B33 292 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 SENP5Q96HI0 755 aaPredicted RBP18.59■□□□□ 0.57
VSX1-202ENST00000376709 ABCB9Q9NP78 766 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 PRDM6Q9NQX0 595 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 TRAPPC4Q9Y296 219 aa18.59■□□□□ 0.57
VSX1-202ENST00000376709 HEATR5AQ86XA9 2040 aa18.58■□□□□ 0.57
VSX1-202ENST00000376709 A0A1W2PQL4 384 aaPredicted RBP18.58■□□□□ 0.57
VSX1-202ENST00000376709 IFNGP01579 166 aa18.58■□□□□ 0.57
VSX1-202ENST00000376709 MRPL3P09001 348 aaKnown RBP18.58■□□□□ 0.57
VSX1-202ENST00000376709 HPGDP15428 266 aa18.58■□□□□ 0.57
VSX1-202ENST00000376709 HSD11B2P80365 405 aa18.58■□□□□ 0.57
VSX1-202ENST00000376709 SNAP47Q5SQN1 464 aa18.58■□□□□ 0.57
VSX1-202ENST00000376709 DDI2Q5TDH0 399 aa18.58■□□□□ 0.57
VSX1-202ENST00000376709 ARIH2OSQ8N7S6 290 aa18.58■□□□□ 0.57
VSX1-202ENST00000376709 LMF1Q96S06 567 aa18.58■□□□□ 0.57
VSX1-202ENST00000376709 DCLRE1CQ96SD1 692 aaKnown RBP18.58■□□□□ 0.57
VSX1-202ENST00000376709 SACM1LQ9NTJ5 587 aa18.58■□□□□ 0.57
VSX1-202ENST00000376709 SDK1Q7Z5N4 2213 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 TP53BP1Q12888 1972 aaPredicted RBP18.58■□□□□ 0.56
VSX1-202ENST00000376709 K7ESF4 209 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 GABRPO00591 440 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 CLPSP04118 112 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 CLUP10909 449 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 CXCL12P48061 93 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 ZNF362Q5T0B9 420 aaPredicted RBP18.58■□□□□ 0.56
VSX1-202ENST00000376709 MED25Q71SY5 747 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 MARCH9Q86YJ5 346 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 OR7G1Q8NGA0 311 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 NEIL3Q8TAT5 605 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 DNAJA4Q8WW22 397 aaPredicted RBP18.58■□□□□ 0.56
VSX1-202ENST00000376709 HPS1Q92902 700 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 GUCD1Q96NT3 240 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 ERMAPQ96PL5 475 aaPredicted RBP18.58■□□□□ 0.56
VSX1-202ENST00000376709 LANCL2Q9NS86 450 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 BABAM2Q9NXR7 383 aa18.58■□□□□ 0.56
VSX1-202ENST00000376709 SLC35F4A4IF30 521 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 CCDC182A6NF36 153 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 A8MUA0 341 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 POLR1CO15160 346 aaPredicted RBP18.57■□□□□ 0.56
VSX1-202ENST00000376709 APOA1P02647 267 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 EIF2B2P49770 351 aaKnown RBP18.57■□□□□ 0.56
VSX1-202ENST00000376709 BDH1Q02338 343 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 CSTF1Q05048 431 aaKnown RBP18.57■□□□□ 0.56
VSX1-202ENST00000376709 SLC43A2Q8N370 569 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 GATSQ8NAP1 163 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 PTPMT1Q8WUK0 201 aaPredicted RBP18.57■□□□□ 0.56
VSX1-202ENST00000376709 SGTBQ96EQ0 304 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 INPP5EQ9NRR6 644 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 DHCR7Q9UBM7 475 aaKnown RBP18.57■□□□□ 0.56
VSX1-202ENST00000376709 EML5Q05BV3 1969 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 SPEGQ15772 3267 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 IGHV1OR21-1A0A087WYE8 117 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 CD8B2A6NJW9 211 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 DYRK3O43781 588 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 HYAL3O43820 417 aaPredicted RBP18.57■□□□□ 0.56
VSX1-202ENST00000376709 GYPBP06028 91 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 CD8BP10966 210 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 AZGP1P25311 298 aaKnown RBP18.57■□□□□ 0.56
VSX1-202ENST00000376709 CAV3P56539 151 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 CBX3Q13185 183 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 FHL1Q13642 323 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 GALEQ14376 348 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 INSL4Q14641 139 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 ZMAT1Q5H9K5 638 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 VASNQ6EMK4 673 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 DESI1Q6ICB0 168 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 FAM131AQ6UXB0 335 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 ZNF527Q8NB42 609 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.57■□□□□ 0.56
VSX1-202ENST00000376709 OR8D2Q9GZM6 311 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 TRIM36Q9NQ86 728 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 ASB6Q9NWX5 421 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 FBXL4Q9UKA2 621 aa18.57■□□□□ 0.56
VSX1-202ENST00000376709 A0A087WUJ7 227 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 DUX1O43812 170 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 SSX4O60224 188 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 NDUFB2O95178 105 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 SLC37A1P57057 533 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 CARTPTQ16568 116 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 KLHL26Q53HC5 615 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 PLXDC1Q8IUK5 500 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 ZNF321PQ8N8H1 164 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 ZBTB8BQ8NAP8 495 aaPredicted RBP18.56■□□□□ 0.56
VSX1-202ENST00000376709 FAM98AQ8NCA5 519 aaKnown RBP18.56■□□□□ 0.56
VSX1-202ENST00000376709 GALNT6Q8NCL4 622 aa18.56■□□□□ 0.56
VSX1-202ENST00000376709 OR5M3Q8NGP4 307 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms