RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 CCDC115Q96NT0 180 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 POTEKPQ9BYX7 375 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 POLE3Q9NRF9 147 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 ACER3Q9NUN7 267 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 AIG1Q9NVV5 245 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 ING1Q9UK53 422 aaPredicted RBP18.67■□□□□ 0.58
VSX1-201ENST00000376707 DSCAMO60469 2012 aa18.67■□□□□ 0.58
VSX1-201ENST00000376707 ZNF814B7Z6K7 855 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 C9JVG2 144 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 HDAC3O15379 428 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 CYTIPO60759 359 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 CD3EP07766 207 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 CHI3L1P36222 383 aaPredicted RBP18.66■□□□□ 0.58
VSX1-201ENST00000376707 DIO1P49895 249 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 KHKP50053 298 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 ATP5J2P56134 94 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 CSNK2A1P68400 391 aaPredicted RBP18.66■□□□□ 0.58
VSX1-201ENST00000376707 MAPK14Q16539 360 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 NCMAPQ5T1S8 102 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 ADAM5Q6NVV9 412 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 Q6ZT83 130 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 BHLHA15Q7RTS1 189 aaPredicted RBP18.66■□□□□ 0.58
VSX1-201ENST00000376707 SPATA19Q7Z5L4 167 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 ZNF563Q8TA94 476 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 SLC25A43Q8WUT9 341 aaPredicted RBP18.66■□□□□ 0.58
VSX1-201ENST00000376707 ZNF775Q96BV0 537 aaPredicted RBP18.66■□□□□ 0.58
VSX1-201ENST00000376707 ROPN1LQ96C74 230 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 TLCD1Q96CP7 247 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 TEX37Q96LM6 180 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 PRSS50Q9UI38 385 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 BTNL2Q9UIR0 455 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 LAMP3Q9UQV4 416 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 SLC35A3Q9Y2D2 325 aa18.66■□□□□ 0.58
VSX1-201ENST00000376707 SPIN1Q9Y657 262 aaPredicted RBP18.66■□□□□ 0.58
VSX1-201ENST00000376707 TRPC5OSA6NMA1 111 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 SULT2B1O00204 365 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 ERLIN1O75477 346 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 FESP07332 822 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 TFPIP10646 304 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 S100A3P33764 101 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 MAGOHP61326 146 aaKnown RBP18.65■□□□□ 0.58
VSX1-201ENST00000376707 UFM1P61960 85 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 RPS4XP62701 263 aaKnown RBP18.65■□□□□ 0.58
VSX1-201ENST00000376707 HPCAP84074 193 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 SYT14P1Q58G82 188 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 BEND6Q5SZJ8 279 aaPredicted RBP18.65■□□□□ 0.58
VSX1-201ENST00000376707 TYW3Q6IPR3 259 aaKnown RBP18.65■□□□□ 0.58
VSX1-201ENST00000376707 TMPPEQ6ZT21 453 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 FBXW5Q969U6 566 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 ZNF300Q96RE9 604 aaPredicted RBP18.65■□□□□ 0.58
VSX1-201ENST00000376707 SAP130Q9H0E3 1048 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 MARCOQ9UEW3 520 aaPredicted RBP18.65■□□□□ 0.58
VSX1-201ENST00000376707 GPR45Q9Y5Y3 372 aa18.65■□□□□ 0.58
VSX1-201ENST00000376707 ZNF724A8MTY0 619 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 SLCO1B7G3V0H7 640 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 LYZL6O75951 148 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 RYKP34925 604 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 PGM1P36871 562 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 APOBEC1P41238 236 aaKnown RBP18.64■□□□□ 0.57
VSX1-201ENST00000376707 STK11Q15831 433 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 GPAT3Q53EU6 434 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 ATG16L1Q676U5 607 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 FRRS1Q6ZNA5 592 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 GALNT5Q7Z7M9 940 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 ZNF100Q8IYN0 542 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 FAM71CQ8NEG0 241 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 LILRB1Q8NHL6 650 aaPredicted RBP18.64■□□□□ 0.57
VSX1-201ENST00000376707 MGARPQ8TDB4 240 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 SLC35A5Q9BS91 424 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 WDR55Q9H6Y2 383 aaPredicted RBP18.64■□□□□ 0.57
VSX1-201ENST00000376707 TMBIM4Q9HC24 238 aa18.64■□□□□ 0.57
VSX1-201ENST00000376707 ROS1P08922 2347 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 HEATR5AQ86XA9 2040 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 EPHA3P29320 983 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 IL12AP29459 219 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 BSPH1Q075Z2 132 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 LRRC74AQ0VAA2 488 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 FUT5Q11128 374 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.63■□□□□ 0.57
VSX1-201ENST00000376707 PIWIL2Q8TC59 973 aaKnown RBP18.63■□□□□ 0.57
VSX1-201ENST00000376707 ZNF75CPQ92670 426 aaPredicted RBP18.63■□□□□ 0.57
VSX1-201ENST00000376707 ZHX1-C8orf76Q96EF9 292 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 MANSC1Q9H8J5 431 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 CTPS2Q9NRF8 586 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 NKIRAS1Q9NYS0 192 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 EMC3Q9P0I2 261 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 CHRNA9Q9UGM1 479 aa18.63■□□□□ 0.57
VSX1-201ENST00000376707 ABCA2Q9BZC7 2435 aa18.62■□□□□ 0.57
VSX1-201ENST00000376707 NSD1Q96L73 2696 aaPredicted RBP18.62■□□□□ 0.57
VSX1-201ENST00000376707 BCAS1O75363 584 aaPredicted RBP18.62■□□□□ 0.57
VSX1-201ENST00000376707 PGRP06401 933 aa18.62■□□□□ 0.57
VSX1-201ENST00000376707 EDNRAP25101 427 aa18.62■□□□□ 0.57
VSX1-201ENST00000376707 PCSK6P29122 969 aa18.62■□□□□ 0.57
VSX1-201ENST00000376707 NME5P56597 212 aa18.62■□□□□ 0.57
VSX1-201ENST00000376707 TXNL4AP83876 142 aaKnown RBP18.62■□□□□ 0.57
VSX1-201ENST00000376707 PPA1Q15181 289 aa18.62■□□□□ 0.57
VSX1-201ENST00000376707 GRINAQ7Z429 371 aa18.62■□□□□ 0.57
VSX1-201ENST00000376707 HMGN2P46Q86SG4 172 aa18.62■□□□□ 0.57
VSX1-201ENST00000376707 ATG4DQ86TL0 474 aaPredicted RBP18.62■□□□□ 0.57
VSX1-201ENST00000376707 MTDHQ86UE4 582 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms