RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 HMGN1P05114 100 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 PSKH1P11801 424 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 AZGP1P25311 298 aaKnown RBP8.82□□□□□ -1
TRIM39-202ENST00000376659 CDONQ4KMG0 1287 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 PDZK1Q5T2W1 519 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 HBMQ6B0K9 141 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 ZNF544Q6NX49 715 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 FIGNL1Q6PIW4 674 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 UNQ9370/PRO34162Q6UXP9 181 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 TCTE3Q8IZS6 198 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 SMAP2Q8WU79 429 aaPredicted RBP8.82□□□□□ -1
TRIM39-202ENST00000376659 SMPDL3BQ92485 455 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 SNX18Q96RF0 628 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 LRRC61Q9BV99 259 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 PRRG3Q9BZD7 231 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 NEK6Q9HC98 313 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 EXOSC4Q9NPD3 245 aaKnown RBP8.82□□□□□ -1
TRIM39-202ENST00000376659 C14orf105Q9NVL8 296 aa8.82□□□□□ -1
TRIM39-202ENST00000376659 KIR2DS5A0A0G2JLQ3 304 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 A0A0G2JNG1 304 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 C2orf92A0A1B0GVN3 265 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 KIR2DS3K7RE56 304 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 IMPA2O14732 288 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 SCO2O43819 266 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 GALNSP34059 522 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 RABIFP47224 123 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 KIR2DS5Q14953 304 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.81□□□□□ -1
TRIM39-202ENST00000376659 KLHL26Q53HC5 615 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 FAM27D1Q5T7N8 215 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 CSNK1A1LQ8N752 337 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 OR51G2Q8NGK0 314 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 OR5M3Q8NGP4 307 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 CHRNA10Q9GZZ6 450 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 SLC22A4Q9H015 551 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 TP63Q9H3D4 680 aaPredicted RBP8.81□□□□□ -1
TRIM39-202ENST00000376659 TNFRSF10DQ9UBN6 386 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 FBXL21Q9UKT6 434 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 CLCA2Q9UQC9 943 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 PIAS3Q9Y6X2 628 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 MUC3AQ02505 3323 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 TCRBV21S2A2A0A5A6 115 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 CHST10O43529 356 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 RDH16O75452 317 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 WNT1P04628 370 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 HK1P19367 917 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 ALAS2P22557 587 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 OR10A3P58181 314 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 POU6F2P78424 691 aaPredicted RBP8.81□□□□□ -1
TRIM39-202ENST00000376659 ISXQ2M1V0 245 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 LINC01590Q5TEZ4 76 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 FAM131AQ6UXB0 335 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 NPEPL1Q8NDH3 523 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 NEIL3Q8TAT5 605 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 RGP1Q92546 391 aaPredicted RBP8.81□□□□□ -1
TRIM39-202ENST00000376659 PTCHD1Q96NR3 888 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 MOV10Q9HCE1 1003 aaKnown RBP8.81□□□□□ -1
TRIM39-202ENST00000376659 PRM3Q9NNZ6 103 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 KLHL28Q9NXS3 571 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 CD207Q9UJ71 328 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 TRBV23OR9-2A0A075B6M9 112 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 LRRC72A6NJI9 287 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 SNTNA6NMZ2 147 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 WISP1O95388 367 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 HLA-DPB1P04440 258 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 EIF2S1P05198 315 aaKnown RBP8.81□□□□□ -1
TRIM39-202ENST00000376659 IFI30P13284 250 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 CELP19835 753 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 SLC6A1P30531 599 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 ADH7P40394 386 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 DEFA1P59665 94 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 DEFA3P59666 94 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 MARCH9Q86YJ5 346 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 DTX3Q8N9I9 347 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 C19orf47Q8N9M1 422 aaKnown RBP8.81□□□□□ -1
TRIM39-202ENST00000376659 OR2B2Q9GZK3 357 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 CCDC86Q9H6F5 360 aaKnown RBP8.81□□□□□ -1
TRIM39-202ENST00000376659 RNF121Q9H920 327 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 LANCL2Q9NS86 450 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 TOR4AQ9NXH8 423 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 TMEM5Q9Y2B1 443 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 SLC35A3Q9Y2D2 325 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 PCNX3Q9H6A9 2034 aa8.81□□□□□ -1
TRIM39-202ENST00000376659 FABP12A6NFH5 140 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 MCIDASD6RGH6 385 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 CRYZL1O95825 349 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 YIF1BQ5BJH7 314 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 KIAA0895LQ68EN5 471 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 DNM1P46Q6ZS02 220 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 ACBD7Q8N6N7 88 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 OR9A4Q8NGU2 314 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 OR5W2Q8NH69 310 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 AP3S1Q92572 193 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 C1GALT1C1Q96EU7 318 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 CD180Q99467 661 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 RBFOX1Q9NWB1 397 aaKnown RBP8.8□□□□□ -1
TRIM39-202ENST00000376659 GMEB2Q9UKD1 530 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 COPS3Q9UNS2 423 aa8.8□□□□□ -1
TRIM39-202ENST00000376659 TDRD6O60522 2096 aaKnown RBP8.8□□□□□ -1
TRIM39-202ENST00000376659 A0A087WV48 116 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms