RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 CHRNEQ04844 493 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 CAMK2BQ13554 666 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 MS4A13Q5J8X5 152 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 SYT13Q7L8C5 426 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 OR7G3Q8NG95 312 aa10.96□□□□□ -0.65
VPS13A-205ENST00000376636 M6PRP20645 277 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 MKXQ8IYA7 352 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 OR52N2Q8NGI0 321 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 KCNK6Q9Y257 313 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 SCGB1C2P0DMR2 95 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 ZNF44P15621 663 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 SSTR2P30874 369 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 PCGF2P35227 344 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 UBE2G1P62253 170 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 LTBQ06643 244 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 GALNT2Q10471 571 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 MRPL38Q96DV4 380 aaKnown RBP10.96□□□□□ -0.66
VPS13A-205ENST00000376636 ZNF337Q9Y3M9 751 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 BLACEA4D250 179 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 CLDN8P56748 225 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 ZNF33BQ06732 778 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 TCTE1Q5JU00 501 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 ABHD17BQ5VST6 288 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 WDR5BQ86VZ2 330 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 CLDN1O95832 211 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 LARP4Q71RC2 724 aaKnown RBP eCLIP10.96□□□□□ -0.66
VPS13A-205ENST00000376636 ADGRG3Q86Y34 549 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 KDM1BQ8NB78 822 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 HUS1BQ8NHY5 278 aa10.96□□□□□ -0.66
VPS13A-205ENST00000376636 SERTAD2Q14140 314 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 SLC17A1Q14916 467 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 ZNF718Q3SXZ3 478 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 PRAMEF27A3QJZ7 478 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 RPL11P62913 178 aaKnown RBP10.95□□□□□ -0.66
VPS13A-205ENST00000376636 SLC25A11Q02978 314 aaKnown RBP10.95□□□□□ -0.66
VPS13A-205ENST00000376636 PRAMEF9Q5VWM5 478 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 YIPF5Q969M3 257 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 FAM71F1Q96KD3 344 aaPredicted RBP10.95□□□□□ -0.66
VPS13A-205ENST00000376636 SUSD3Q96L08 255 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 NIT2Q9NQR4 276 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 TMEM235A6NFC5 223 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 SSTR4P31391 388 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 IRF7Q92985 503 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 ECHDC3Q96DC8 303 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 SCPEP1Q9HB40 452 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 ZNF355PQ9NSJ1 428 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 DCAF16Q9NXF7 216 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 HOXB5P09067 269 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 SYN1P17600 705 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 GABRA4P48169 554 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 SLCO5A1Q9H2Y9 848 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 INTS6Q9UL03 887 aaKnown RBP10.95□□□□□ -0.66
VPS13A-205ENST00000376636 UBR1Q8IWV7 1749 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 ZNF860A6NHJ4 632 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 SMLR1H3BR10 107 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 TCAPO15273 167 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 FLT3LGP49771 235 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 ARHGAP11BQ3KRB8 267 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 KCNK13Q9HB14 408 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 GAB2Q9UQC2 676 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 OR13C9Q8NGT0 318 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 GPR34Q9UPC5 381 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 ANKUB1A6NFN9 424 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 TMEM212A6NML5 194 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 TGOLN2O43493 480 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 GLYR1Q49A26 553 aaPredicted RBP10.95□□□□□ -0.66
VPS13A-205ENST00000376636 C6orf89Q6UWU4 347 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 ENTHD1Q8IYW4 607 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 ZNF596Q8TC21 504 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 ADAMTS16Q8TE57 1224 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 NDFIP1Q9BT67 221 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 ENPP4Q9Y6X5 453 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 DBHP09172 617 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 GABRA5P31644 462 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 SUOXP51687 545 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 ZNF133P52736 654 aaPredicted RBP10.95□□□□□ -0.66
VPS13A-205ENST00000376636 DIO3P55073 304 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 RPS26P62854 115 aaKnown RBP10.95□□□□□ -0.66
VPS13A-205ENST00000376636 COTL1Q14019 142 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 GUK1Q16774 197 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 OR4K5Q8NGD3 323 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 ATF6BQ99941 703 aa10.95□□□□□ -0.66
VPS13A-205ENST00000376636 METTL17Q9H7H0 456 aaPredicted RBP10.95□□□□□ -0.66
VPS13A-205ENST00000376636 FOXE1O00358 373 aaPredicted RBP10.94□□□□□ -0.66
VPS13A-205ENST00000376636 DPP4P27487 766 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 SEC61A1P61619 476 aaKnown RBP10.94□□□□□ -0.66
VPS13A-205ENST00000376636 NNATQ16517 81 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 DCAF12L1Q5VU92 463 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 OR5H6Q8NGV6 325 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 NPRL2Q8WTW4 380 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 C4orf36Q96KX1 117 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 CNOT2Q9NZN8 540 aaKnown RBP10.94□□□□□ -0.66
VPS13A-205ENST00000376636 OSGIN2Q9Y236 505 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 CD63P08962 238 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 STAG3L2P0CL84 134 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 OMGP23515 440 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 IGFN1Q86VF2 1251 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 CDS1Q92903 461 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 SSUH2Q9Y2M2 353 aa10.94□□□□□ -0.66
VPS13A-205ENST00000376636 SPO11Q9Y5K1 396 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms