RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 CENPVL1A0A0U1RR11 272 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 ANTXRLA6NF34 631 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 UBL3O95164 117 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 GYPBP06028 91 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 UGT2B7P16662 529 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 RAB3BP20337 219 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 CTHP32929 405 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 STAT5AP42229 794 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 ALKAL2Q6UX46 152 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 MEPCEQ7L2J0 689 aaKnown RBP10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 FGD2Q7Z6J4 655 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 C17orf64Q86WR6 236 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 PRSS58Q8IYP2 241 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 OR56B4Q8NH76 319 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 ACOT11Q8WXI4 607 aaPredicted RBP10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 PTP4A1Q93096 173 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 CNRIP1Q96F85 164 aaPredicted RBP10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 OR7D2Q96RA2 312 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 BBS4Q96RK4 519 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 SPATA5L1Q9BVQ7 753 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 TRIM36Q9NQ86 728 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 TM7SF3Q9NS93 570 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 SLC7A7Q9UM01 511 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 AK6Q9Y3D8 172 aaKnown RBP10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 WASH3PC4AMC7 463 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 F8A1P23610 371 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 NUP62P37198 522 aaPredicted RBP10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 TAS2R38P59533 333 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 RPS7P62081 194 aaKnown RBP10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 MELKQ14680 651 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 TMEM164Q5U3C3 297 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 CDC73Q6P1J9 531 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 LCTLQ6UWM7 567 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 C3P1Q6ZMU1 363 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 PXKQ7Z7A4 578 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 SERPINA12Q8IW75 414 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 PFN4Q8NHR9 129 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 GHSRQ92847 366 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 SIPA1Q96FS4 1042 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 SLC41A3Q96GZ6 507 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 SCLYQ96I15 445 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 MCHR1Q99705 422 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 SLC46A2Q9BY10 475 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 WDR26Q9H7D7 661 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 C20orf141Q9NUB4 165 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 KLHL9Q9P2J3 617 aa10.66□□□□□ -0.7
TM9SF2-201ENST00000376387 CDHR4A6H8M9 788 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 LRRN3E7EW58 273 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 CD46P15529 392 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 CST5P28325 142 aaPredicted RBP10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 TM4SF4P48230 202 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 GNG10P50151 68 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 PDX1P52945 283 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 ZNF85Q03923 595 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 ZNF273Q14593 569 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 STPG1Q5TH74 334 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 RGS7BPQ6MZT1 257 aaPredicted RBP10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 ATRAIDQ6UW56 229 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 WDR88Q6ZMY6 472 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 DPPA4Q7L190 304 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 PARS2Q7L3T8 475 aaKnown RBP10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 HDDC2Q7Z4H3 204 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 UXS1Q8NBZ7 420 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 SETD7Q8WTS6 366 aaKnown RBP10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 CNOT9Q92600 299 aaKnown RBP10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 PEX11GQ96HA9 241 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 HHIPL1Q96JK4 782 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 JAM3Q9BX67 310 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 LRRN3Q9H3W5 708 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 MGAT4CQ9UBM8 478 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 SLC23A2Q9UGH3 650 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 IRAK3Q9Y616 596 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 PLSCR5A0PG75 271 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 ZNF98A6NK75 572 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 ARPC1BO15143 372 aaKnown RBP10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 SPINT1O43278 529 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 PLPP2O43688 288 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 SC5DO75845 299 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 NMBP08949 121 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 SELPP16109 830 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 MAKP20794 623 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 GSK3AP49840 483 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 BDH1Q02338 343 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 GRM7Q14831 915 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 C18orf63Q68DL7 685 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 OR5M10Q6IEU7 315 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.65□□□□□ -0.72e-10■■■□□ 18.3
TM9SF2-201ENST00000376387 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 CMIPQ8IY22 773 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 NRSN1Q8IZ57 195 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 CYB561A3Q8NBI2 242 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 RGMAQ96B86 450 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 PPP1R16AQ96I34 528 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 DERL3Q96Q80 235 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 PARD6GQ9BYG4 376 aaPredicted RBP10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 OR52D1Q9H346 318 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 KIF25Q9UIL4 384 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 SLC13A4Q9UKG4 626 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 UNC80Q8N2C7 3258 aa10.65□□□□□ -0.7
TM9SF2-201ENST00000376387 A0A0A6YYD5 115 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms