RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 SFTPA2Q8IWL1 248 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SIGLEC11Q96RL6 698 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ABHD1Q96SE0 405 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FOLH1BQ9HBA9 442 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TP53BP1Q12888 1972 aaPredicted RBP13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 UNC13CQ8NB66 2214 aa13.35□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RFPL3O75679 317 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 KCNAB1Q14722 419 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TMEM44Q2T9K0 475 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 LEG1Q6P5S2 330 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 LILRA6Q6PI73 481 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 METAP1DQ6UB28 335 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ALKAL2Q6UX46 152 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TMPRSS9Q7Z410 1059 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 COMMD7Q86VX2 200 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 LNX2Q8N448 690 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR52R1Q8NGF1 315 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 THAP3Q8WTV1 239 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 TRIM43Q96BQ3 446 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 B3GNT4Q9C0J1 378 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SLC6A20Q9NP91 592 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MAN2C1Q9NTJ4 1040 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SURF4O15260 269 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HTR1FP30939 366 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MLLT3P42568 568 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PCBP4P57723 403 aaKnown RBP13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PXDC1Q5TGL8 231 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MBOAT2Q6ZWT7 520 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CAMKVQ8NCB2 501 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 OR4N2Q8NGD1 307 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RASD2Q96D21 266 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FCRL1Q96LA6 429 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 APOOQ9BUR5 198 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ARL6Q9H0F7 186 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SELENOFO60613 162 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SNTA1Q13424 505 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 HLA-DQA1Q5Y7H0 255 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ZNF776Q68DI1 518 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 LRRC28Q86X40 367 aaPredicted RBP13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 FAM109AQ8N4B1 249 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 NSMAFQ92636 917 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 MAP6Q96JE9 813 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RAB11FIP5Q9BXF6 653 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 CENPMQ9NSP4 180 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 PHF11Q9UIL8 331 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 ICKQ9UPZ9 632 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 POLR1DQ9Y2S0 133 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 SESN1Q9Y6P5 492 aa13.34□□□□□ -0.27
TNFRSF1B-201ENST00000376259 DOCK9Q9BZ29 2069 aa13.33□□□□□ -0.27
TNFRSF1B-201ENST00000376259 RECKO95980 971 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CXCL3P19876 107 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 RPS21P63220 83 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ARHGAP19Q14CB8 494 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 BEX5Q5H9J7 111 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 APOOLQ6UXV4 268 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ABHD13Q7L211 337 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 REM2Q8IYK8 340 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CSNK1A1LQ8N752 337 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SPPL3Q8TCT6 385 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 SDF2Q99470 211 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 DDOQ99489 341 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 TRIM2Q9C040 744 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 RNF32Q9H0A6 362 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 TDRD6O60522 2096 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CXCL10P02778 98 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 TFP02787 698 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PTGS2P35354 604 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 GDNFP39905 211 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CDK5Q00535 292 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 DEFA5Q01523 94 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PYHIN1Q6K0P9 492 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 MORN4Q8NDC4 146 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 GON7Q9BXV9 100 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 MTIF3Q9H2K0 278 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 C11orf49Q9H6J7 331 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 NOX4Q9NPH5 578 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 LHX9Q9NQ69 397 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 ACOXLQ9NUZ1 547 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 KCND3Q9UK17 655 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 CBLCQ9ULV8 474 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 LSM2Q9Y333 95 aaKnown RBP13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PATJQ8NI35 1801 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 TMEM72A0PK05 275 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 C4orf51C9J302 202 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 KLHL18O94889 574 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PAPLNO95428 1278 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 KLF8O95600 359 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 IFNA7P01567 189 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PTH2RP49190 550 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 HBMQ6B0K9 141 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 JAGN1Q8N5M9 183 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 FAM174AQ8TBP5 190 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 MMABQ96EY8 250 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 TSPAN10Q9H1Z9 355 aaPredicted RBP13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 C12orf4Q9NQ89 552 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 PCDHGB7Q9Y5F8 929 aa13.33□□□□□ -0.28
TNFRSF1B-201ENST00000376259 A0A0B4J293 547 aa13.32□□□□□ -0.28
TNFRSF1B-201ENST00000376259 A0A1B0GWA3 101 aa13.32□□□□□ -0.28
TNFRSF1B-201ENST00000376259 NPIPB8E9PQR5 432 aa13.32□□□□□ -0.28
TNFRSF1B-201ENST00000376259 H0YGG7 62 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms