RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 TMEM99Q8N816 258 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 SCARB1Q8WTV0 552 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 OR5P2Q8WZ92 322 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 RAB7BQ96AH8 199 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 LCORQ96JN0 433 aaPredicted RBP11.97□□□□□ -0.49
MSH5-204ENST00000375755 C7orf50Q9BRJ6 194 aaKnown RBP11.97□□□□□ -0.49
MSH5-204ENST00000375755 XKR8Q9H6D3 395 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 SUSD5O60279 629 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 C5AR1P21730 350 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 GDNFP39905 211 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 RAD52P43351 418 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 MAZP56270 477 aaKnown RBP11.97□□□□□ -0.49
MSH5-204ENST00000375755 FLI1Q01543 452 aaPredicted RBP11.97□□□□□ -0.49
MSH5-204ENST00000375755 TSPAN31Q12999 210 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 HSD17B13Q7Z5P4 300 aaPredicted RBP11.97□□□□□ -0.49
MSH5-204ENST00000375755 LRRTM4Q86VH4 590 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 FRMD1Q8N878 549 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 MRPS24Q96EL2 167 aaKnown RBP11.97□□□□□ -0.49
MSH5-204ENST00000375755 ZNF576Q9H609 170 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 HINT3Q9NQE9 182 aaKnown RBP11.97□□□□□ -0.49
MSH5-204ENST00000375755 EMC3Q9P0I2 261 aa11.97□□□□□ -0.49
MSH5-204ENST00000375755 FRYLO94915 3013 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 TBC1D3DA0A087WVF3 549 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 TBC1D3IA0A087WXS9 549 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 TBC1D3EA0A087X179 549 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 TBC1D3KA0A087X1G2 549 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 FEZF1A0PJY2 475 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 TBC1D3FA6NER0 549 aaPredicted RBP11.96□□□□□ -0.49
MSH5-204ENST00000375755 OR52A4PA6NMU1 304 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 CHURC1-FNTBB4DL54 471 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 TBC1D3LB9A6J9 549 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 J3QRE1 110 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 ASGR2P07307 311 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 TBC1D3HP0C7X1 549 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 CCR8P51685 355 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 BDH1Q02338 343 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 DYRK1AQ13627 763 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 TBC1D3GQ6DHY5 549 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 TBC1D3CQ6IPX1 549 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 SYT9Q86SS6 491 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 TBC1D3Q8IZP1 549 aaPredicted RBP11.96□□□□□ -0.49
MSH5-204ENST00000375755 ZNF454Q8N9F8 522 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 OR1S1Q8NH92 325 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 SMPDL3AQ92484 453 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 ALG8Q9BVK2 526 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 SGPP1Q9BX95 441 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 CYB5R1Q9UHQ9 305 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 ENTPD4Q9Y227 616 aa11.96□□□□□ -0.49
MSH5-204ENST00000375755 C17orf113A0A1B0GUU1 675 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 RTCAO00442 366 aaKnown RBP11.96□□□□□ -0.5
MSH5-204ENST00000375755 GALR3O60755 368 aaPredicted RBP11.96□□□□□ -0.5
MSH5-204ENST00000375755 C1GALT1C1LP0DN25 315 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 NR2F1P10589 423 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 HOXB2P14652 356 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 IGFALSP35858 605 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 BUD31P41223 144 aaPredicted RBP11.96□□□□□ -0.5
MSH5-204ENST00000375755 ADPRHP54922 357 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 SLC3A1Q07837 685 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 MLF2Q15773 248 aaPredicted RBP11.96□□□□□ -0.5
MSH5-204ENST00000375755 SZRD1Q7Z422 152 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 SLC9B2Q86UD5 537 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 CPOQ8IVL8 374 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 OR5W2Q8NH69 310 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 TEX101Q9BY14 249 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 TEX10Q9NXF1 929 aaPredicted RBP11.96□□□□□ -0.5
MSH5-204ENST00000375755 TAC3Q9UHF0 121 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 TRIOBPQ9H2D6 2365 aa11.96□□□□□ -0.5
MSH5-204ENST00000375755 POM121BA6NF01 834 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 ARPC1BO15143 372 aaKnown RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 PGRMC2O15173 223 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 FRS3O43559 492 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 HYAL3O43820 417 aaPredicted RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 RNGTTO60942 597 aaKnown RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 KDM4BO94953 1096 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 ADH1BP00325 375 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 ATF1P18846 271 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 NTSR1P30989 418 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 PITPNAQ00169 270 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 METRNLQ641Q3 311 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 ZNF776Q68DI1 518 aaPredicted RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 SLC25A25Q6KCM7 469 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 CDC73Q6P1J9 531 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 NHLRC1Q6VVB1 395 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 TPRA1Q86W33 373 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 ABHD4Q8TB40 342 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 HMGB4Q8WW32 186 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 SLC5A11Q8WWX8 675 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 GCDHQ92947 438 aaPredicted RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 AHCYL2Q96HN2 611 aaKnown RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 INSM2Q96T92 566 aaPredicted RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 SLC17A9Q9BYT1 436 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 DPEP2Q9H4A9 486 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 EVA1AQ9H8M9 152 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 NTMQ9P121 344 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 RCE1Q9Y256 329 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 OR2M5A3KFT3 312 aa11.95□□□□□ -0.5
MSH5-204ENST00000375755 NARSO43776 548 aaKnown RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 GIPP09681 153 aaPredicted RBP11.95□□□□□ -0.5
MSH5-204ENST00000375755 PSMB1P20618 241 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms