RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 AK1P00568 194 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 S1PR1P21453 382 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 CDH11P55287 796 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 WNT4P56705 351 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 DBPQ10586 325 aaPredicted RBP12.91□□□□□ -0.34
MSH5-202ENST00000375740 ERV3-1Q14264 604 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.91□□□□□ -0.34
MSH5-202ENST00000375740 BMPERQ8N8U9 685 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 SLC37A3Q8NCC5 494 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 OR11H4Q8NGC9 324 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 PFN4Q8NHR9 129 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 PEX11GQ96HA9 241 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 SLC2A4RGQ9NR83 387 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 C20orf141Q9NUB4 165 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 SSR3Q9UNL2 185 aa12.91□□□□□ -0.34
MSH5-202ENST00000375740 SPIN1Q9Y657 262 aaPredicted RBP12.91□□□□□ -0.34
MSH5-202ENST00000375740 HYKKA2RU49 373 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 UNC119BA6NIH7 251 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 CHURC1-FNTBB4DL54 471 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 TGFBR3LH3BV60 316 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 FOXS1O43638 330 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 CDC123O75794 336 aaPredicted RBP12.9□□□□□ -0.34
MSH5-202ENST00000375740 IFI6P09912 130 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 SLC2A2P11168 524 aaPredicted RBP12.9□□□□□ -0.34
MSH5-202ENST00000375740 CPEP16870 476 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 MAKP20794 623 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 MAOBP27338 520 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 PLAURQ03405 335 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 FAM122CQ6P4D5 195 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 HSDL2Q6YN16 418 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 Q8N402 240 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 OR2T33Q8NG76 320 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 DNAJA4Q8WW22 397 aaPredicted RBP12.9□□□□□ -0.34
MSH5-202ENST00000375740 TMEM239Q8WW34 195 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 TTYH1Q9H313 450 aaPredicted RBP12.9□□□□□ -0.34
MSH5-202ENST00000375740 CDCP1Q9H5V8 836 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 KRCC1Q9NPI7 259 aaPredicted RBP12.9□□□□□ -0.34
MSH5-202ENST00000375740 CA14Q9ULX7 337 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 AUP1Q9Y679 476 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 CSNK1G3Q9Y6M4 447 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 OR2W5A6NFC9 320 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 HRKO00198 91 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 AKAP8O43823 692 aaKnown RBP12.9□□□□□ -0.34
MSH5-202ENST00000375740 ZGLP1P0C6A0 271 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 LIMS3P0CW19 117 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 LIMS4P0CW20 117 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 SDHBP21912 280 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 MAT1AQ00266 395 aaKnown RBP12.9□□□□□ -0.34
MSH5-202ENST00000375740 PSG6Q00889 435 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 TDGQ13569 410 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 ZMYND11Q15326 602 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 LHFPL3Q86UP9 236 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 ZNF687Q8N1G0 1237 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 C19orf18Q8NEA5 215 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 DUSP18Q8NEJ0 188 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 BBS1Q8NFJ9 593 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 OR4N2Q8NGD1 307 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 OR6C4Q8NGE1 309 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 LHFPL5Q8TAF8 219 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 LMX1AQ8TE12 382 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 TM9SF4Q92544 642 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 CNOT9Q92600 299 aaKnown RBP12.9□□□□□ -0.34
MSH5-202ENST00000375740 HOXB13Q92826 284 aaPredicted RBP12.9□□□□□ -0.34
MSH5-202ENST00000375740 RFKQ969G6 155 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 PHF7Q9BWX1 381 aaPredicted RBP12.9□□□□□ -0.34
MSH5-202ENST00000375740 UBQLN3Q9H347 655 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 HEXA-AS1Q9H8Q6 139 aa12.9□□□□□ -0.34
MSH5-202ENST00000375740 TMEM131Q92545 1883 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 TMEM129A0AVI4 362 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 LYRM1O43325 122 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 SRPX2O60687 465 aaPredicted RBP12.89□□□□□ -0.35
MSH5-202ENST00000375740 ZNF217O75362 1048 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 HMGN1P05114 100 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 DRD5P21918 477 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 BMP8BP34820 402 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 CD79BP40259 229 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 EMDP50402 254 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 CLDN20P56880 219 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 STX4Q12846 297 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 MRPL28Q13084 256 aaKnown RBP12.89□□□□□ -0.35
MSH5-202ENST00000375740 FCN2Q15485 313 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 LAPTM4BQ86VI4 370 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 COMMD7Q86VX2 200 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 RNF113BQ8IZP6 322 aaKnown RBP12.89□□□□□ -0.35
MSH5-202ENST00000375740 CLDN22Q8N7P3 220 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 OR4F15Q8NGB8 312 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 PMM1Q92871 262 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 RIT1Q92963 219 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 RBM18Q96H35 190 aaKnown RBP12.89□□□□□ -0.35
MSH5-202ENST00000375740 HYLS1Q96M11 299 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 ENKD1Q9H0I2 346 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 FOLH1BQ9HBA9 442 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 MED17Q9NVC6 651 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 SIDT1Q9NXL6 827 aaKnown RBP12.89□□□□□ -0.35
MSH5-202ENST00000375740 CBLCQ9ULV8 474 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 MGAT4AQ9UM21 535 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 EXOSC1Q9Y3B2 195 aaKnown RBP12.89□□□□□ -0.35
MSH5-202ENST00000375740 RFPL3O75679 317 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 PROS1P07225 676 aa12.89□□□□□ -0.35
MSH5-202ENST00000375740 RNH1P13489 461 aaKnown RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms