RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 SYT14P1Q58G82 188 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 OGFOD2Q6N063 350 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 RNF130Q86XS8 419 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 ZNF619Q8N2I2 560 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 ZNF611Q8N823 705 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 ANKRD42Q8N9B4 389 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 FAM71CQ8NEG0 241 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 ZNF563Q8TA94 476 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 RAB3IL1Q8TBN0 382 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 TMEM171Q8WVE6 324 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 OIT3Q8WWZ8 545 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 AKAP1Q92667 903 aaKnown RBP eCLIP12.62□□□□□ -0.39
NELFE-201ENST00000375425 ZNF75CPQ92670 426 aaPredicted RBP12.62□□□□□ -0.39
NELFE-201ENST00000375425 KISS1RQ969F8 398 aaPredicted RBP12.62□□□□□ -0.39
NELFE-201ENST00000375425 CCDC115Q96NT0 180 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 ZNF300Q96RE9 604 aaPredicted RBP12.62□□□□□ -0.39
NELFE-201ENST00000375425 GSX2Q9BZM3 304 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 CTPS2Q9NRF8 586 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 HEATR5AQ86XA9 2040 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 CCDC154A6NI56 674 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 H7C1Q1 480 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 HMGN4O00479 90 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 SDHDO14521 159 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 PGRP06401 933 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 EDNRAP25101 427 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 IL12AP29459 219 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 OR3A2P47893 321 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 KHKP50053 298 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 WDR4P57081 412 aaKnown RBP12.62□□□□□ -0.39
NELFE-201ENST00000375425 CSNK2A1P68400 391 aaPredicted RBP12.62□□□□□ -0.39
NELFE-201ENST00000375425 CAPRIN1Q14444 709 aaKnown RBP12.62□□□□□ -0.39
NELFE-201ENST00000375425 Q6ZT83 130 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 SPATA19Q7Z5L4 167 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 CROCCP2Q86T23 111 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 MTDHQ86UE4 582 aaKnown RBP12.62□□□□□ -0.39
NELFE-201ENST00000375425 LILRB1Q8NHL6 650 aaPredicted RBP12.62□□□□□ -0.39
NELFE-201ENST00000375425 COX4I2Q96KJ9 171 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 PANX1Q96RD7 426 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 BDH2Q9BUT1 245 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 CCDC106Q9BWC9 280 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 CXorf56Q9H5V9 222 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 WDR55Q9H6Y2 383 aaPredicted RBP12.62□□□□□ -0.39
NELFE-201ENST00000375425 NGBQ9NPG2 151 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.62□□□□□ -0.39
NELFE-201ENST00000375425 AIG1Q9NVV5 245 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 THAP1Q9NVV9 213 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 PRSS50Q9UI38 385 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 LAMP3Q9UQV4 416 aa12.62□□□□□ -0.39
NELFE-201ENST00000375425 GOLGA8QA0A0J9YX86 632 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 GOLGA8OA6NCC3 632 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 TRIM64A6NGJ6 449 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 TRIM64BA6NI03 449 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 ZNF724A8MTY0 619 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 FAM171A2A8MVW0 826 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 GOLGA8NF8WBI6 632 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 ADAM11O75078 769 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 LYZL6O75951 148 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 FESP07332 822 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 TFPIP10646 304 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 KITP10721 976 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 PAX1P15863 534 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 EPHA3P29320 983 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 CDKN2CP42773 168 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 HPCAP84074 193 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 SYPL1Q16563 259 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 NCMAPQ5T1S8 102 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 ZNF621Q6ZSS3 439 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 BHLHA15Q7RTS1 189 aaPredicted RBP12.61□□□□□ -0.39
NELFE-201ENST00000375425 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.61□□□□□ -0.39
NELFE-201ENST00000375425 GRINAQ7Z429 371 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 ATG4DQ86TL0 474 aaPredicted RBP12.61□□□□□ -0.39
NELFE-201ENST00000375425 ADGRG3Q86Y34 549 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 ARFGAP2Q8N6H7 521 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 TRIML2Q8N7C3 387 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 SLC25A43Q8WUT9 341 aaPredicted RBP12.61□□□□□ -0.39
NELFE-201ENST00000375425 DNAJA3Q96EY1 480 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 TRNT1Q96Q11 434 aaKnown RBP12.61□□□□□ -0.39
NELFE-201ENST00000375425 OR52E6Q96RD3 313 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 USB1Q9BQ65 265 aaKnown RBP12.61□□□□□ -0.39
NELFE-201ENST00000375425 INPP5KQ9BT40 448 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 ESRP2Q9H6T0 727 aaKnown RBP12.61□□□□□ -0.39
NELFE-201ENST00000375425 ZNF701Q9NV72 531 aaPredicted RBP12.61□□□□□ -0.39
NELFE-201ENST00000375425 CHRNA9Q9UGM1 479 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 GPR45Q9Y5Y3 372 aa12.61□□□□□ -0.39
NELFE-201ENST00000375425 SPIN1Q9Y657 262 aaPredicted RBP12.61□□□□□ -0.39
NELFE-201ENST00000375425 FREM1Q5H8C1 2179 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 ZANQ9Y493 2812 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 TMEM120BA0PK00 339 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 TRPC5OSA6NMA1 111 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 SMAD7O15105 426 aaKnown RBP12.6□□□□□ -0.39
NELFE-201ENST00000375425 HDAC3O15379 428 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 CLOCKO15516 846 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 SNNO75324 88 aaPredicted RBP12.6□□□□□ -0.39
NELFE-201ENST00000375425 CNOT4O95628 575 aaKnown RBP12.6□□□□□ -0.39
NELFE-201ENST00000375425 LY6G6DO95868 133 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 GSNP06396 782 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 HEXAP06865 529 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 CD3EP07766 207 aa12.6□□□□□ -0.39
NELFE-201ENST00000375425 FKBP2P26885 142 aaKnown RBP12.6□□□□□ -0.39
NELFE-201ENST00000375425 IDH2P48735 452 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms