RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 SFXN4Q6P4A7 337 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 USP53Q70EK8 1073 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 NR2C2APQ86WQ0 139 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 SERPINA12Q8IW75 414 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ZFP82Q8N141 532 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 RELL2Q8NC24 303 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ZNF485Q8NCK3 441 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 PIGKQ92643 395 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 PPP1R16AQ96I34 528 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 LYSMD1Q96S90 227 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 MNTQ99583 582 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 RDH14Q9HBH5 336 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 PRMT8Q9NR22 394 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 MBNL1Q9NR56 388 aaKnown RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 CA14Q9ULX7 337 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 COL4A3Q01955 1670 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ZDBF2Q9HCK1 2354 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 KCNE1BA0A087WTH5 132 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 TRBV23-1A0A0A0MS06 115 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 FFAR1O14842 300 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 PGRMC2O15173 223 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 RECKO95980 971 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ATXN8OSP0DMR3 200 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 HSD3B1P14060 373 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 MAPK3P27361 379 aaPredicted RBP11.29□□□□□ -0.6
C9orf3-203ENST00000375315 GIPRP48546 466 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 CAPZA1P52907 286 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ACSM1Q08AH1 577 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 KIAA1161Q6NSJ0 714 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 Q6ZS52 159 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 RNF175Q8N4F7 328 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 OR11G2Q8NGC1 345 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 BTBD1Q9H0C5 482 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 PRDM6Q9NQX0 595 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 NANSQ9NR45 359 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ZFP57Q9NU63 452 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 MKL2Q9ULH7 1088 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 PLAGL1Q9UM63 463 aa11.29□□□□□ -0.6
C9orf3-203ENST00000375315 ATG2AQ2TAZ0 1938 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 IGHV2-70P01814 119 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 PRF1P14222 555 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 SPI1P17947 270 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 EPORP19235 508 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 THBS2P35442 1172 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 DRD3P35462 400 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 PTGFRP43088 359 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 PGDP52209 483 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 SMIM11AP58511 58 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 MLLT1Q03111 559 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-203ENST00000375315 NDUFA9Q16795 377 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 BAIAP2L2Q6UXY1 529 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 GLDNQ6ZMI3 551 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-203ENST00000375315 DPPA4Q7L190 304 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 LRRC70Q7Z2Q7 622 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 SLC44A3Q8N4M1 653 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 OR6K3Q8NGY3 331 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 THAP6Q8TBB0 222 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 RGMAQ96B86 450 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 TMEM159Q96B96 161 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 SLC35A5Q9BS91 424 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 ENKD1Q9H0I2 346 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 PIGMQ9H3S5 423 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 GULP1Q9UBP9 304 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 OR6C68A6NDL8 312 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 ARPC1BO15143 372 aaKnown RBP11.28□□□□□ -0.6
C9orf3-203ENST00000375315 NME6O75414 186 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-203ENST00000375315 UBBP0CG47 229 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 UBCP0CG48 685 aaKnown RBP11.28□□□□□ -0.6
C9orf3-203ENST00000375315 OR12D1P0DN82 309 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 PAICSP22234 425 aaKnown RBP11.28□□□□□ -0.6
C9orf3-203ENST00000375315 STAT5AP42229 794 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 LIM2P55344 173 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 CLDN2P57739 230 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 SNRPEP62304 92 aaKnown RBP11.28□□□□□ -0.6
C9orf3-203ENST00000375315 RPS27AP62979 156 aaKnown RBP11.28□□□□□ -0.6
C9orf3-203ENST00000375315 UBA52P62987 128 aaKnown RBP11.28□□□□□ -0.6
C9orf3-203ENST00000375315 TRAM2Q15035 370 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 HENMT1Q5T8I9 393 aaKnown RBP11.28□□□□□ -0.6
C9orf3-203ENST00000375315 SLC30A6Q6NXT4 461 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 TMEM184AQ6ZMB5 413 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 SKA3Q8IX90 412 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 ARMC10Q8N2F6 343 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 L3MBTL4Q8NA19 623 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 TMEM185AQ8NFB2 350 aa11.28□□□□□ -0.6
C9orf3-203ENST00000375315 AKAP7Q9P0M2 348 aaPredicted RBP11.28□□□□□ -0.6
C9orf3-203ENST00000375315 NAP1L6A6NFF2 107 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 LRRC72A6NJI9 287 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 SLC9B1P1A6NJY1 282 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 EFCAB7A8K855 629 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 SC5DO75845 299 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 MST1P26927 711 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 SMCO1Q147U7 214 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 SLC5A12Q1EHB4 618 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 EOGTQ5NDL2 527 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 ACSM5Q6NUN0 579 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 ZNF852Q6ZMS4 543 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 CBARPQ8N350 705 aaPredicted RBP11.27□□□□□ -0.6
C9orf3-203ENST00000375315 TBC1D19Q8N5T2 526 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 RLN3Q8WXF3 142 aa11.27□□□□□ -0.6
C9orf3-203ENST00000375315 RBM14Q96PK6 669 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms