RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 TMIEQ8NEW7 156 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 OR13C2Q8NGS9 318 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 LIPHQ8WWY8 451 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 AGAP4Q96P64 663 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 APMAPQ9HDC9 416 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 AGPAT4Q9NRZ5 378 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 TMEM9Q9P0T7 183 aa13.77□□□□□ -0.21
NOTCH4-201ENST00000375023 COL2A1P02458 1487 aaPredicted RBP13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 C1orf105O95561 183 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 ITGB7P26010 798 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 GNB1P62873 340 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 STEAP4Q687X5 459 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 HAS2Q92819 552 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 HCAR1Q9BXC0 346 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 KLF16Q9BXK1 252 aaPredicted RBP13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 VRTNQ9H8Y1 702 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 COL14A1Q05707 1796 aaKnown RBP13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 ZNF736B4DX44 427 aaPredicted RBP13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 SSX4O60224 188 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 ZNF623O75123 536 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 TNFSF15O95150 251 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 LPLP06858 475 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 CD38P28907 300 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 DCTP40126 519 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 HTD2P86397 168 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 SPATS1Q496A3 300 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 FAM78AQ5JUQ0 283 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 WFDC8Q8IUA0 241 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 PDZD9Q8IXQ8 264 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 CDRT4Q8N9R6 151 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 OR13J1Q8NGT2 312 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 ZNF420Q8TAQ5 688 aaPredicted RBP13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 DTD2Q96FN9 168 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 NDUFAF4Q9P032 175 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 SCRG1O75711 98 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 CA5AP35218 305 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 HTR5AP47898 357 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 WNT4P56705 351 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 SERTAD2Q14140 314 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 SELPLGQ14242 412 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 SLC46A3Q7Z3Q1 461 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 SLC7A5P1Q8MH63 180 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 CNOT9Q92600 299 aaKnown RBP13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 LYRM1O43325 122 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 EGFP01133 1207 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 C1SP09871 688 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 PDE7AQ13946 482 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 SF3B4Q15427 424 aaKnown RBP eCLIP13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 C19orf48Q6RUI8 117 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 ADAMTS16Q8TE57 1224 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 DUSP19Q8WTR2 217 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 SLC29A1Q99808 456 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 PBDC1Q9BVG4 233 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 TUBB1Q9H4B7 451 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 PRAMEF27A3QJZ7 478 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 LGALS8O00214 317 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 RPS2P15880 293 aaKnown RBP13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 GABRA5P31644 462 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 ALDH3B2P48448 385 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 PRAMEF9Q5VWM5 478 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 ENDOVQ8N8Q3 282 aaKnown RBP13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 UTP23Q9BRU9 249 aaKnown RBP13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 NTMT1Q9BV86 223 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 TPPP3Q9BW30 176 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 RLIMQ9NVW2 624 aa13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 DNMT3BQ9UBC3 853 aaKnown RBP13.76□□□□□ -0.21
NOTCH4-201ENST00000375023 ILKQ13418 452 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 SIX1Q15475 284 aaPredicted RBP13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 DESI1Q6ICB0 168 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 DMBX1Q8NFW5 382 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 OR1N1Q8NGS0 311 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 OR2T35Q8NGX2 323 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 OR14K1Q8NGZ2 314 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 NT5C3BQ969T7 300 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 PRR14Q9BWN1 585 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 CALCBP10092 127 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 TANGO2Q6ICL3 276 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 GLB1L2Q8IW92 636 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 ELOVL3Q9HB03 270 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 GALNT9Q9HCQ5 603 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 ATP23Q9Y6H3 246 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 URB1O60287 2271 aaKnown RBP13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 FAM166BA8MTA8 275 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 E7ESA3 106 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 IDUAP35475 653 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 CST9LP1Q5W188 147 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 C6orf89Q6UWU4 347 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 RSPRY1Q96DX4 576 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 SMOC1Q9H4F8 434 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 CACNG2Q9Y698 323 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 NUDT7P0C024 238 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 CPMP14384 443 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 HLA-FP30511 346 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 SLC14A1Q13336 389 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 TRILQ7L0X0 811 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 INSM2Q96T92 566 aaPredicted RBP13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 NFAT5O94916 1531 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 IGHV3-20A0A0C4DH32 117 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 VEGFCP49767 419 aa13.75□□□□□ -0.21
NOTCH4-201ENST00000375023 ACTBP60709 375 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms