RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 SLC25A46Q96AG3 418 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 KCTD7Q96MP8 289 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 CCDC86Q9H6F5 360 aaKnown RBP14.31□□□□□ -0.12
CCDC40-202ENST00000374876 ERVK13-1Q9NX77 482 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 NPIPA5A0A0B4J1W7 369 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 IQCMA0A1B0GVH7 501 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 CDHR4A6H8M9 788 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 UNC119BA6NIH7 251 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 CDRT15L2A8MXV6 281 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 NPIPA7E9PJI5 369 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 TIAF1O95411 115 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 NPIPA8P0DM63 369 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 HTR1FP30939 366 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 RPS25P62851 125 aaKnown RBP14.31□□□□□ -0.12
CCDC40-202ENST00000374876 CD300CQ08708 224 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 DSG2Q14126 1118 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 NXNL2Q5VZ03 156 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 TMPRSS11AQ6ZMR5 421 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 RNF113BQ8IZP6 322 aaKnown RBP14.31□□□□□ -0.12
CCDC40-202ENST00000374876 ZBTB8BQ8NAP8 495 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-202ENST00000374876 OR4F15Q8NGB8 312 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 FANK1Q8TC84 345 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 OTULINQ96BN8 352 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 ZNF501Q96CX3 271 aaPredicted RBP14.31□□□□□ -0.12
CCDC40-202ENST00000374876 PRSS27Q9BQR3 290 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 ARHGAP9Q9BRR9 750 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 DPH1Q9BZG8 443 aa14.31□□□□□ -0.12
CCDC40-202ENST00000374876 TMEM150CB9EJG8 249 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 OR10H2O60403 315 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 RDH16O75452 317 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 DXOO77932 396 aaKnown RBP14.3□□□□□ -0.12
CCDC40-202ENST00000374876 SLC2A10O95528 541 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 APOA1P02647 267 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 CT62P0C5K7 136 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 GABRA5P31644 462 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 TGM4P49221 684 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 EIF2B2P49770 351 aaKnown RBP14.3□□□□□ -0.12
CCDC40-202ENST00000374876 RAB38P57729 211 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 ACY1Q03154 408 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 MGAT2Q10469 447 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 ZNF155Q12901 538 aaPredicted RBP14.3□□□□□ -0.12
CCDC40-202ENST00000374876 CRTC2Q53ET0 693 aaPredicted RBP14.3□□□□□ -0.12
CCDC40-202ENST00000374876 TMEM164Q5U3C3 297 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 OR8H2Q8N162 312 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 BBS1Q8NFJ9 593 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 OR52L1Q8NGH7 329 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 OR1L3Q8NH93 324 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 TMEM239Q8WW34 195 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 HPS1Q92902 700 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 UBQLN3Q9H347 655 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 KCNE5Q9UJ90 142 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 RARRES3Q9UL19 164 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 YARS2Q9Y2Z4 477 aaKnown RBP14.3□□□□□ -0.12
CCDC40-202ENST00000374876 CMAHPQ9Y471 501 aa14.3□□□□□ -0.12
CCDC40-202ENST00000374876 FMO6PO60774 539 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 IFI6P09912 130 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 GABRA4P48169 554 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 PSPHP78330 225 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 HNRNPA0Q13151 305 aaKnown RBP14.29□□□□□ -0.12
CCDC40-202ENST00000374876 IL11RAQ14626 422 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 PWWP2BQ6NUJ5 590 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 IGF2-ASQ6U949 168 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 PPP1R3BQ86XI6 285 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 LAX1Q8IWV1 398 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 KLHL36Q8N4N3 616 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 PFN4Q8NHR9 129 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 BRIX1Q8TDN6 353 aaKnown RBP14.29□□□□□ -0.12
CCDC40-202ENST00000374876 PMM1Q92871 262 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 ANKRD9Q96BM1 317 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-202ENST00000374876 SDHCQ99643 169 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-202ENST00000374876 TM9SF2Q99805 663 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 SPRTNQ9H040 489 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-202ENST00000374876 OR52D1Q9H346 318 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 C14orf119Q9NWQ9 140 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 CBLCQ9ULV8 474 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 TRAPPC4Q9Y296 219 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 EXOGQ9Y2C4 368 aaKnown RBP14.29□□□□□ -0.12
CCDC40-202ENST00000374876 GSTK1Q9Y2Q3 226 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 GXYLT2A0PJZ3 443 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 CHST10O43529 356 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 TLX3O43711 291 aaPredicted RBP14.29□□□□□ -0.12
CCDC40-202ENST00000374876 COQ9O75208 318 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 SLC35E2P0CK97 266 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 FGF5P12034 268 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 IFI30P13284 250 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 ZNF28P17035 718 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 BMP7P18075 431 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 CD79BP40259 229 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 RFX3P48380 749 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 SLC9A3P48764 834 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 CBX3Q13185 183 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 WDR88Q6ZMY6 472 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 QSOX2Q6ZRP7 698 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 CXXC5Q7LFL8 322 aaKnown RBP14.29□□□□□ -0.12
CCDC40-202ENST00000374876 CPOQ8IVL8 374 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 MCATQ8IVS2 390 aaKnown RBP14.29□□□□□ -0.12
CCDC40-202ENST00000374876 CDK20Q8IZL9 346 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 VWA5B2Q8N398 1253 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 PSD4Q8NDX1 1056 aa14.29□□□□□ -0.12
CCDC40-202ENST00000374876 OR52R1Q8NGF1 315 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms