RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 TOR1AIP2Q8NFQ8 470 aa12.63□□□□□ -0.39
UBXN11-207ENST00000374223 AKAP1Q92667 903 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBXN11-207ENST00000374223 NEURL3Q96EH8 262 aa12.63□□□□□ -0.39
UBXN11-207ENST00000374223 SLC35A5Q9BS91 424 aa12.63□□□□□ -0.39
UBXN11-207ENST00000374223 CCDC106Q9BWC9 280 aa12.63□□□□□ -0.39
UBXN11-207ENST00000374223 SAP130Q9H0E3 1048 aa12.63□□□□□ -0.39
UBXN11-207ENST00000374223 GLRX2Q9NS18 164 aa12.63□□□□□ -0.39
UBXN11-207ENST00000374223 AIG1Q9NVV5 245 aa12.63□□□□□ -0.39
UBXN11-207ENST00000374223 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.63□□□□□ -0.39
UBXN11-207ENST00000374223 GPR52Q9Y2T5 361 aa12.63□□□□□ -0.39
UBXN11-207ENST00000374223 WDR45Q9Y484 360 aa12.63□□□□□ -0.39
UBXN11-207ENST00000374223 FBN3Q75N90 2809 aa12.63□□□□□ -0.39
UBXN11-207ENST00000374223 DPRXA6NFQ7 191 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 H3BNH8 94 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 TM9SF1O15321 606 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 ZNF500O60304 480 aaPredicted RBP12.62□□□□□ -0.39
UBXN11-207ENST00000374223 CYTIPO60759 359 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 NDUFS7O75251 213 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 SOD3P08294 240 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 IGHV1-2P23083 117 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 S100A3P33764 101 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 DIO1P49895 249 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 RAC3P60763 192 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 RASGEF1BQ0VAM2 473 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 SELENBP1Q13228 472 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 GTDC1Q4AE62 458 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 SLC9B1Q4ZJI4 515 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 ADGRG3Q86Y34 549 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 CCDC103Q8IW40 242 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 MAPK1IP1LQ8NDC0 245 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 KBTBD8Q8NFY9 601 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 TESCQ96BS2 214 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 CCDC115Q96NT0 180 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 MDFIQ99750 246 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 SLC38A1Q9H2H9 487 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 ACER3Q9NUN7 267 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 NPAP1Q9NZP6 1156 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 GPR45Q9Y5Y3 372 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 YLPM1P49750 1951 aaKnown RBP12.62□□□□□ -0.39
UBXN11-207ENST00000374223 A0A1W2PR80 420 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 ZC3H12DA2A288 527 aaKnown RBP12.62□□□□□ -0.39
UBXN11-207ENST00000374223 CCDC154A6NI56 674 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 KIAA1324LA8MWY0 1029 aaPredicted RBP12.62□□□□□ -0.39
UBXN11-207ENST00000374223 E9PBE3 544 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 HS3ST1O14792 307 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 PCSK6P29122 969 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 SLC7A1P30825 629 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 OR3A2P47893 321 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 PPP2R2BQ00005 443 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 RNPS1Q15287 305 aaKnown RBP12.62□□□□□ -0.39
UBXN11-207ENST00000374223 GPAT3Q53EU6 434 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 NCMAPQ5T1S8 102 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 C20orf204Q6ZNR8 217 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 RSPO3Q9BXY4 272 aaPredicted RBP12.62□□□□□ -0.39
UBXN11-207ENST00000374223 BCO1Q9HAY6 547 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 LAMP3Q9UQV4 416 aa12.62□□□□□ -0.39
UBXN11-207ENST00000374223 CUBNO60494 3623 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 JMJD1CQ15652 2540 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 TMEM120BA0PK00 339 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 TMEM72A0PK05 275 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 ZNF716A6NP11 495 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 CLOCKO15516 846 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 SNNO75324 88 aaPredicted RBP12.61□□□□□ -0.39
UBXN11-207ENST00000374223 IMPDH2P12268 514 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 CHI3L1P36222 383 aaPredicted RBP12.61□□□□□ -0.39
UBXN11-207ENST00000374223 CDKN1AP38936 164 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 MVDP53602 400 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 KCNJ10P78508 379 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 SYT14P1Q58G82 188 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 ANXA8L1Q5VT79 327 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 AP1ARQ63HQ0 302 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 OGFOD2Q6N063 350 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 C3orf33Q6P1S2 294 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 DNAJC14Q6Y2X3 702 aaPredicted RBP12.61□□□□□ -0.39
UBXN11-207ENST00000374223 TMPPEQ6ZT21 453 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 EIF3MQ7L2H7 374 aaKnown RBP12.61□□□□□ -0.39
UBXN11-207ENST00000374223 BHLHA15Q7RTS1 189 aaPredicted RBP12.61□□□□□ -0.39
UBXN11-207ENST00000374223 STK32CQ86UX6 486 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 OR9I1Q8NGQ6 314 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 SPATA3Q8NHX4 192 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 ST8SIA1Q92185 356 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 REXO5Q96IC2 774 aaKnown RBP12.61□□□□□ -0.39
UBXN11-207ENST00000374223 OR52B2Q96RD2 323 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 RLIMQ9NVW2 624 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 BTNL2Q9UIR0 455 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 PCDHGB4Q9UN71 923 aa12.61□□□□□ -0.39
UBXN11-207ENST00000374223 SONP18583 2426 aaKnown RBP12.6□□□□□ -0.39
UBXN11-207ENST00000374223 HIVEP2P31629 2446 aa12.6□□□□□ -0.39
UBXN11-207ENST00000374223 DUXAA6NLW8 204 aa12.6□□□□□ -0.39
UBXN11-207ENST00000374223 SULT2B1O00204 365 aa12.6□□□□□ -0.39
UBXN11-207ENST00000374223 CNOT4O95628 575 aaKnown RBP12.6□□□□□ -0.39
UBXN11-207ENST00000374223 CD8AP01732 235 aa12.6□□□□□ -0.39
UBXN11-207ENST00000374223 DANCRP0C864 163 aa12.6□□□□□ -0.39
UBXN11-207ENST00000374223 GKN3PP0CG01 181 aa12.6□□□□□ -0.39
UBXN11-207ENST00000374223 TFPIP10646 304 aa12.6□□□□□ -0.39
UBXN11-207ENST00000374223 PPP3CBP16298 524 aa12.6□□□□□ -0.39
UBXN11-207ENST00000374223 PGCP20142 388 aa12.6□□□□□ -0.39
UBXN11-207ENST00000374223 IL32P24001 234 aa12.6□□□□□ -0.39
UBXN11-207ENST00000374223 IDH2P48735 452 aaKnown RBP12.6□□□□□ -0.39
UBXN11-207ENST00000374223 KHKP50053 298 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms