RNA–Protein interactions for RNA: ENST00000373711.3

CDKN1A-202, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDKN1A, Length 793 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-202ENST00000373711 PIP5K1BO14986 540 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 NUDT14O95848 222 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 TGFAP01135 160 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 PRPS2P11908 318 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 CFPP27918 469 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 AQP5P55064 265 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 C2orf80Q0P641 193 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 FOXF1Q12946 379 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 SLC9B1Q4ZJI4 515 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 EPGNQ6UW88 154 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 ZNF100Q8IYN0 542 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 CDRT4Q8N9R6 151 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 ZNF540Q8NDQ6 660 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 OR2T11Q8NH01 316 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 CEP70Q8NHQ1 597 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 POC1BQ8TC44 478 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 PIK3R3Q92569 461 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 HTRA1Q92743 480 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 NPAS1Q99742 590 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 PSD2Q9BQI7 771 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 EBF4Q9BQW3 602 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 INPP5KQ9BT40 448 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 EBPLQ9BY08 206 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 ACPTQ9BZG2 426 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 ADAM19Q9H013 955 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 GLIPR2Q9H4G4 154 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 EQTNQ9NQ60 294 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 TAS2R7Q9NYW3 318 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 PRSS50Q9UI38 385 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 WBP11Q9Y2W2 641 aaKnown RBP13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 CCL27Q9Y4X3 112 aa13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 GPC6Q9Y625 555 aaPredicted RBP13.08□□□□□ -0.32
CDKN1A-202ENST00000373711 CIB4A0PJX0 185 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 GXYLT2A0PJZ3 443 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 SERTM1A2A2V5 107 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 ZNF724A8MTY0 619 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 SNX3O60493 162 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 NKX2-2O95096 273 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 FAM107AO95990 144 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 IGKV1D-16P01601 117 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 LINGO3P0C6S8 592 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 TROVE2P10155 538 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 IGHV1-2P23083 117 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 CD40P25942 277 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 GPC1P35052 558 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 SRP14P37108 136 aaKnown RBP13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 NR4A2P43354 598 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 IDH3AP50213 366 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 SUMO3P55854 103 aaPredicted RBP13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 RAC3P60763 192 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 RASGEF1BQ0VAM2 473 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 SELENBP1Q13228 472 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 CR1LQ2VPA4 569 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 TMEM176BQ3YBM2 270 aaPredicted RBP13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 IQCCQ4KMZ1 466 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 RNF165Q6ZSG1 346 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 DDIASQ8IXT1 998 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 KIRREL3Q8IZU9 778 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 OR4C3Q8NH37 302 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 SGMS2Q8NHU3 365 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.07□□□□□ -0.323e-8■■■□□ 16.8
CDKN1A-202ENST00000373711 C10orf82Q8WW14 230 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 APIPQ96GX9 242 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 AMDHD1Q96NU7 426 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 TMEM120AQ9BXJ8 343 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 NSRP1Q9H0G5 558 aaKnown RBP13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 WDR55Q9H6Y2 383 aaPredicted RBP13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 MEAF6Q9HAF1 191 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 SIRT5Q9NXA8 310 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 EMC3Q9P0I2 261 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 KLHL14Q9P2G3 628 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 GIMAP2Q9UG22 337 aa13.07□□□□□ -0.32
CDKN1A-202ENST00000373711 A0A0G2JND7 137 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 LOC390937A0A1W2PQ73 354 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 VWC2LB2RUY7 222 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 H3BNH8 94 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 CHEK2O96017 543 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 PCMT1P22061 227 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 ENPP1P22413 925 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 SHC1P29353 583 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 APOBEC3AP31941 199 aaPredicted RBP13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 ZNF83P51522 516 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 XKR7Q5GH72 579 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 TRIM46Q7Z4K8 759 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 SPATA21Q7Z572 469 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 GALNT5Q7Z7M9 940 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 ZNF527Q8NB42 609 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 ZFP28Q8NHY6 868 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 ZFAND2BQ8WV99 257 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 C3orf49Q96BT1 292 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 MAELQ96JY0 434 aaKnown RBP13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 OR52B2Q96RD2 323 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 PRR14Q9BWN1 585 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 CXorf36Q9H7Y0 433 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 COQ10BQ9H8M1 238 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 ATP23Q9Y6H3 246 aa13.06□□□□□ -0.32
CDKN1A-202ENST00000373711 A0A0A6YYJ9 748 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 CCT8L1PA6NM43 557 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 TRPC5OSA6NMA1 111 aa13.05□□□□□ -0.32
CDKN1A-202ENST00000373711 M0R1B8 84 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms