RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ASCC3Q8N3C0 2202 aaKnown RBP10.61□□□□□ -0.71
TSPAN1-201ENST00000372003 CFAP54Q96N23 3096 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 DMXL1Q9Y485 3027 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 OR6C74A6NCV1 312 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 GTPBP1O00178 669 aaKnown RBP10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 AGRPO00253 132 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 PROS1P07225 676 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 CD1CP29017 333 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 ID4P47928 161 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 CAV3P56539 151 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 CTBP2P56545 445 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 MFSD13AQ14CX5 517 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 NTRK2Q16620 822 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 KHDRBS2Q5VWX1 349 aaKnown RBP10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 BHLHB9Q6PI77 547 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 ZNF322Q6U7Q0 402 aaPredicted RBP10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 TMEM91Q6ZNR0 172 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 FAM129CQ86XR2 697 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 GID4Q8IVV7 300 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 ZNF655Q8N720 491 aaPredicted RBP10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 SFXN5Q8TD22 340 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 ZFPM2Q8WW38 1151 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 RAD51AP1Q96B01 352 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 PHF21AQ96BD5 680 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 MOAP1Q96BY2 351 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 OR51J1Q9H342 316 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 UCK1Q9HA47 277 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 SLAMF7Q9NQ25 335 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 ENAMQ9NRM1 1142 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 MALT1Q9UDY8 824 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 UBQLN2Q9UHD9 624 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 SCP2D1Q9UJQ7 156 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 NPTNQ9Y639 398 aa10.6□□□□□ -0.71
TSPAN1-201ENST00000372003 MEIKINA0A087WXM9 373 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 LILRA5A6NI73 299 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 SMLR1H3BR10 107 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 SAP18O00422 153 aaKnown RBP10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 SURF4O15260 269 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 RNF13O43567 381 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 OR12D1P0DN82 309 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 NR2F1P10589 423 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 DRD2P14416 443 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 CTRB1P17538 263 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 CELP19835 753 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 FPR3P25089 353 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 BTCP35070 178 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 BSGP35613 385 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 RAB14P61106 215 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 E2F1Q01094 437 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 ST3GAL3Q11203 375 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 SNTA1Q13424 505 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 TSTA3Q13630 321 aaPredicted RBP10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 PRAMEF13Q5VWM6 474 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 CTRB2Q6GPI1 263 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 CDC73Q6P1J9 531 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 GRAMD2AQ8IUY3 354 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 TEX19Q8NA77 164 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 LSM14AQ8ND56 463 aaKnown RBP10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 OR11H7Q8NGC8 314 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 PIGXQ8TBF5 258 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 SPRYD4Q8WW59 207 aaPredicted RBP10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 RSC1A1Q92681 617 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 RAB8BQ92930 207 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 CMTM3Q96MX0 182 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 ZNF578Q96N58 590 aaPredicted RBP10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 SECISBP2Q96T21 854 aaKnown RBP10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 GPA33Q99795 319 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 ARHGDIGQ99819 225 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 NUDT22Q9BRQ3 303 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 AIFM2Q9BRQ8 373 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 TMED9Q9BVK6 235 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 MS4A8Q9BY19 250 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 OR51I1Q9H343 314 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 FN3KQ9H479 309 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 RERGLQ9H628 205 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 HRASLS2Q9NWW9 162 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 LYARQ9NX58 379 aaKnown RBP10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 SLCO1C1Q9NYB5 712 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 IL20Q9NYY1 176 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 SH2B3Q9UQQ2 575 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 PCDHGA1Q9Y5H4 931 aa10.59□□□□□ -0.71
TSPAN1-201ENST00000372003 A0A087WUU8 490 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 RPS10-NUDT3A0A1W2PQS6 291 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 SHISA3A0PJX4 238 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 GSAPA4D1B5 854 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 J3QRE1 110 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 M0R3H8 397 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 PLPP1O14494 284 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 CDK2AP1O14519 115 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 DUX1O43812 170 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 B4GALT2O60909 372 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 TMEM127O75204 238 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 LALBAP00709 142 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 TCRBP04435 133 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 CHRM5P08912 532 aaPredicted RBP10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 SULT1A3P0DMM9 295 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 SULT1A4P0DMN0 295 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 RRASP10301 218 aa10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 HOXB3P14651 431 aaPredicted RBP10.58□□□□□ -0.72
TSPAN1-201ENST00000372003 HSD17B2P37059 387 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms