RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 CXXC5Q7LFL8 322 aaKnown RBP18.25■□□□□ 0.51
LHX3-202ENST00000371748 LHFPL3Q86UP9 236 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 TMEM151BQ8IW70 566 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 PRSS58Q8IYP2 241 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 LSMEM1Q8N8F7 131 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 SETD6Q8TBK2 473 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 GATAD2BQ8WXI9 593 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 NACC2Q96BF6 587 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 TRMT61AQ96FX7 289 aaKnown RBP18.25■□□□□ 0.51
LHX3-202ENST00000371748 NDC1Q9BTX1 674 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 EVA1AQ9H8M9 152 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 MED20Q9H944 212 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 NDUFB11Q9NX14 153 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 SIGLEC7Q9Y286 467 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 TMEM5Q9Y2B1 443 aa18.25■□□□□ 0.51
LHX3-202ENST00000371748 SERINC4A6NH21 518 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 CSTAP01040 98 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 CTBP2P56545 445 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 PLBD1Q6P4A8 553 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 ZNF550Q7Z398 422 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 PHC2Q8IXK0 858 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 CARFQ8N187 725 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 GATSQ8NAP1 163 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 ASB15Q8WXK1 588 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 CCDC74AQ96AQ1 378 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 MVB12AQ96EY5 273 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 SLC41A2Q96JW4 573 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 ASPNQ9BXN1 380 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 NDEL1Q9GZM8 345 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 GRIP1Q9Y3R0 1128 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 MMACHCQ9Y4U1 282 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 ADAMTS20P59510 1910 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 LIMS3P0CW19 117 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 LIMS4P0CW20 117 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 ENDOUP21128 410 aaKnown RBP18.24■□□□□ 0.51
LHX3-202ENST00000371748 PSMA1P25786 263 aaKnown RBP18.24■□□□□ 0.51
LHX3-202ENST00000371748 CRYBB2P43320 205 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 ARRB1P49407 418 aaPredicted RBP18.24■□□□□ 0.51
LHX3-202ENST00000371748 PSMD4P55036 377 aaKnown RBP18.24■□□□□ 0.51
LHX3-202ENST00000371748 ZNF79Q15937 498 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 MED25Q71SY5 747 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 UBALD2Q8IYN6 164 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 TM9SF4Q92544 642 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 OR1F2PQ96R84 312 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 ZNF426Q9BUY5 554 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 IFT27Q9BW83 186 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 FSCN3Q9NQT6 498 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 H2AFY2Q9P0M6 372 aaPredicted RBP18.24■□□□□ 0.51
LHX3-202ENST00000371748 PCDHGB2Q9Y5G2 931 aa18.24■□□□□ 0.51
LHX3-202ENST00000371748 SPIN1Q9Y657 262 aaPredicted RBP18.24■□□□□ 0.51
LHX3-202ENST00000371748 RCBTB2O95199 551 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 FBLP22087 321 aaKnown RBP18.23■□□□□ 0.51
LHX3-202ENST00000371748 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.23■□□□□ 0.51
LHX3-202ENST00000371748 BAK1Q16611 211 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.23■□□□□ 0.51
LHX3-202ENST00000371748 LYSMD4Q5XG99 296 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 FCRLBQ6BAA4 426 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 ZNF517Q6ZMY9 492 aaPredicted RBP18.23■□□□□ 0.51
LHX3-202ENST00000371748 OR7G1Q8NGA0 311 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 ZNF304Q9HCX3 659 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 RPS6KB2Q9UBS0 482 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 EXOSC1Q9Y3B2 195 aaKnown RBP18.23■□□□□ 0.51
LHX3-202ENST00000371748 CLCA3PQ9Y6N3 262 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 NUP210LQ5VU65 1888 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 IGKV3D-11A0A0A0MRZ8 115 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 TMEM129A0AVI4 362 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 ZC3H12DA2A288 527 aaKnown RBP18.23■□□□□ 0.51
LHX3-202ENST00000371748 RGS5O15539 181 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 LRRTM2O43300 516 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 HTR1FP30939 366 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 CRYZQ08257 329 aaKnown RBP18.23■□□□□ 0.51
LHX3-202ENST00000371748 BIKQ13323 160 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 LNX2Q8N448 690 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 NXF5Q9H1B4 397 aaKnown RBP18.23■□□□□ 0.51
LHX3-202ENST00000371748 DDX28Q9NUL7 540 aaKnown RBP18.23■□□□□ 0.51
LHX3-202ENST00000371748 SEC14L4Q9UDX3 406 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 STUB1Q9UNE7 303 aa18.23■□□□□ 0.51
LHX3-202ENST00000371748 SCO2O43819 266 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 DDOSTP39656 456 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 SLC1A3P43003 542 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 DSG2Q14126 1118 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 TMEM44Q2T9K0 475 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 ULK3Q6PHR2 472 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 QSOX2Q6ZRP7 698 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 OR9Q1Q8NGQ5 310 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 SLC2A12Q8TD20 617 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 TMEM203Q969S6 136 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 TNFRSF13CQ96RJ3 184 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 DPYSL5Q9BPU6 564 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 HCAR1Q9BXC0 346 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 FGF21Q9NSA1 209 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 SEMA5BQ9P283 1151 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 SERTAD3Q9UJW9 196 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 ATXN7L1Q9ULK2 861 aaPredicted RBP18.22■□□□□ 0.51
LHX3-202ENST00000371748 PTP4A3O75365 173 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 TSPAN19P0C672 248 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 CPEP16870 476 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 ATP6V1E1P36543 226 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 FOXK2Q01167 660 aa18.22■□□□□ 0.51
LHX3-202ENST00000371748 CSTF1Q05048 431 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms