RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 TEKQ02763 1124 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 UPP1Q16831 310 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 PKDCCQ504Y2 493 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 COX20Q5RI15 118 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 MEPCEQ7L2J0 689 aaKnown RBP11.9□□□□□ -0.5
GPC4-201ENST00000370828 SKA3Q8IX90 412 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 CDH26Q8IXH8 852 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 MTMR14Q8NCE2 650 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 OR13C3Q8NGS6 347 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 CREB3L4Q8TEY5 395 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 TOLLIPQ9H0E2 274 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.9□□□□□ -0.5
GPC4-201ENST00000370828 A0A0U1RQF3 1178 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 TMEM82A0PJX8 343 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 C20orf202A1L168 122 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 NPIPA5E9PKD4 350 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 BET1O15155 118 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 COCHO43405 550 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 ARAFP10398 606 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 KIAA0141Q14154 515 aaPredicted RBP11.9□□□□□ -0.5
GPC4-201ENST00000370828 GUK1Q16774 197 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 GPAT4Q86UL3 456 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 GOT1L1Q8NHS2 421 aaPredicted RBP11.9□□□□□ -0.5
GPC4-201ENST00000370828 HCAR2Q8TDS4 363 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 C2orf15Q8WU43 125 aaKnown RBP11.9□□□□□ -0.5
GPC4-201ENST00000370828 GHSRQ92847 366 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 SLC19A3Q9BZV2 496 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 KATNBL1Q9H079 304 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 NPIPA1Q9UND3 350 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 YIPF1Q9Y548 306 aa11.9□□□□□ -0.5
GPC4-201ENST00000370828 TMEM72A0PK05 275 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 LRIT2A6NDA9 550 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 B4GALT2O60909 372 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 CSTAP01040 98 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 TPOP07202 933 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 IGFBP1P08833 259 aaPredicted RBP11.89□□□□□ -0.51
GPC4-201ENST00000370828 APEHP13798 732 aaKnown RBP11.89□□□□□ -0.51
GPC4-201ENST00000370828 RING1Q06587 406 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 GAB1Q13480 694 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 VAMP3Q15836 100 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 AMZ1Q400G9 498 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 XKR7Q5GH72 579 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 ALG10BQ5I7T1 473 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 ATPAF1Q5TC12 328 aaPredicted RBP11.89□□□□□ -0.51
GPC4-201ENST00000370828 TTLL10Q6ZVT0 673 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 ABHD13Q7L211 337 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 BPIFB2Q8N4F0 458 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 NEIL2Q969S2 332 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 CDC6Q99741 560 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 ACKR4Q9NPB9 350 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 PGAP2Q9UHJ9 254 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 KDM3BQ7LBC6 1761 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 TIAM2Q8IVF5 1701 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 MN1Q10571 1320 aaPredicted RBP11.89□□□□□ -0.51
GPC4-201ENST00000370828 IGKV6D-21A0A0A0MT36 114 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 RGS13O14921 159 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 ACSM4P0C7M7 580 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 CHATP28329 748 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 TLE4Q04727 773 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 LTBQ06643 244 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 UBE2NLQ5JXB2 153 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 OR52H1Q8NGJ2 320 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 ABHD4Q8TB40 342 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 KHSRPQ92945 711 aaKnown RBP eCLIP11.89□□□□□ -0.51
GPC4-201ENST00000370828 SLC25A37Q9NYZ2 338 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 IER3IP1Q9Y5U9 82 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 POMT1Q9Y6A1 747 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 TNFSF12O43508 249 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 CDC123O75794 336 aaPredicted RBP11.89□□□□□ -0.51
GPC4-201ENST00000370828 IFNA5P01569 189 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 SLC26A5P58743 744 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 ZNF550Q7Z398 422 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 SCD5Q86SK9 330 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 OR2A12Q8NGT7 310 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 OR5H2Q8NGV7 314 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 ST6GAL2Q96JF0 529 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 OPALINQ96PE5 141 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 WDR77Q9BQA1 342 aaPredicted RBP11.89□□□□□ -0.51
GPC4-201ENST00000370828 DPH7Q9BTV6 452 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 KATNB1Q9BVA0 655 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 MTIF3Q9H2K0 278 aaKnown RBP11.89□□□□□ -0.51
GPC4-201ENST00000370828 TMPRSS5Q9H3S3 457 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 PLCXD1Q9NUJ7 323 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 ATG4BQ9Y4P1 393 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 MROH6A6NGR9 719 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 ATG12O94817 140 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 HMGN2P05204 90 aaKnown RBP11.89□□□□□ -0.51
GPC4-201ENST00000370828 ACTR1BP42025 376 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 CAV2P51636 162 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 ACTR1AP61163 376 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 SQSTM1Q13501 440 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 GPR50Q13585 617 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 ALG10Q5BKT4 473 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 SLC38A3Q99624 504 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 TIMM29Q9BSF4 260 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 CDCA4Q9BXL8 241 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 BRF2Q9HAW0 419 aa11.89□□□□□ -0.51
GPC4-201ENST00000370828 PHRF1Q9P1Y6 1649 aaKnown RBP11.88□□□□□ -0.51
GPC4-201ENST00000370828 TLX3O43711 291 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms