RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SLC35B4Q969S0 331 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 TAMM41Q96BW9 452 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 SDCCAG3Q96C92 435 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 CALHM2Q9HA72 323 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 CTPS2Q9NRF8 586 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 CLCF1Q9UBD9 225 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 CHRNA9Q9UGM1 479 aa13.35□□□□□ -0.27
COL9A1-204ENST00000370496 MBD3L4A6NDZ8 208 aaPredicted RBP13.34□□□□□ -0.27
COL9A1-204ENST00000370496 MBD3L3A6NE82 208 aaPredicted RBP13.34□□□□□ -0.27
COL9A1-204ENST00000370496 MBD3L5A6NJ08 208 aaPredicted RBP13.34□□□□□ -0.27
COL9A1-204ENST00000370496 M0QX08 132 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 TPST1O60507 370 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 IL2RAP01589 272 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 FCGR2AP12318 317 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 SHC1P29353 583 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 TACR3P29371 465 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 SLC1A3P43003 542 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 GSK3BP49841 420 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 HOXC5Q00444 222 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 PON3Q15166 354 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 CTU2Q2VPK5 515 aaKnown RBP13.34□□□□□ -0.27
COL9A1-204ENST00000370496 RIPPLY2Q5TAB7 128 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 WBP2NLQ6ICG8 309 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 C16orf89Q6UX73 402 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 CCDC80Q76M96 950 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 COMTD1Q86VU5 262 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 RANBP3LQ86VV4 465 aaPredicted RBP13.34□□□□□ -0.27
COL9A1-204ENST00000370496 PGAM4Q8N0Y7 254 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 TNIP2Q8NFZ5 429 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 OR10D3Q8NH80 312 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 MBD3L2Q8NHZ7 208 aaPredicted RBP13.34□□□□□ -0.27
COL9A1-204ENST00000370496 ASB5Q8WWX0 329 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 ZNF845Q96IR2 970 aaPredicted RBP13.34□□□□□ -0.27
COL9A1-204ENST00000370496 TM9SF2Q99805 663 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 PAQR5Q9NXK6 330 aaPredicted RBP13.34□□□□□ -0.27
COL9A1-204ENST00000370496 ABCD2Q9UBJ2 740 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 RPS6KB2Q9UBS0 482 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 TESQ9UGI8 421 aaKnown RBP13.34□□□□□ -0.27
COL9A1-204ENST00000370496 MCTS1Q9ULC4 181 aaKnown RBP13.34□□□□□ -0.27
COL9A1-204ENST00000370496 RNF6Q9Y252 685 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 DOCK7Q96N67 2140 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 BAHCC1Q9P281 2608 aa13.34□□□□□ -0.27
COL9A1-204ENST00000370496 TMED7-TICAM2A0A0A6YYA0 188 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 A0A0G2JNJ9 132 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 A1L4Q6 167 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 WIPF3A6NGB9 483 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 HSPB2A8KAH6 182 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 M0R3H8 397 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 SYT5O00445 386 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 CXCL13O43927 109 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 GCM2O75603 506 aaPredicted RBP13.33□□□□□ -0.27
COL9A1-204ENST00000370496 SYNGR4O95473 234 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 IFNA14P01570 189 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 TFPIP10646 304 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 CCNA2P20248 432 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 CALB2P22676 271 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 CHRNB4P30926 498 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 ACAA2P42765 397 aaKnown RBP13.33□□□□□ -0.27
COL9A1-204ENST00000370496 DLX5P56178 289 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 SLC25A3Q00325 362 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 HSPB2Q16082 182 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 TMEM176BQ3YBM2 270 aaPredicted RBP13.33□□□□□ -0.27
COL9A1-204ENST00000370496 SYT14P1Q58G82 188 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 XKRXQ6PP77 449 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 PLXDC2Q6UX71 529 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 SEM1Q6ZVN7 128 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 TRPM8Q7Z2W7 1104 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 CCDC71Q8IV32 467 aaPredicted RBP13.33□□□□□ -0.27
COL9A1-204ENST00000370496 C9orf106Q8NAJ2 232 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 CA5BP1Q8WTZ4 195 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 FIG4Q92562 907 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 PROX1Q92786 737 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 WNT2BQ93097 391 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 ADGRG7Q96K78 797 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 OR5B2Q96R09 309 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 PRRG4Q9BZD6 226 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 EVA1AQ9H8M9 152 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 TIGARQ9NQ88 270 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 GMPR2Q9P2T1 348 aaKnown RBP13.33□□□□□ -0.27
COL9A1-204ENST00000370496 Q9UFV3 132 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 TMED7Q9Y3B3 224 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 ZNF175Q9Y473 711 aa13.33□□□□□ -0.27
COL9A1-204ENST00000370496 DOPEY1Q5JWR5 2465 aa13.33□□□□□ -0.28
COL9A1-204ENST00000370496 A0A0J9YW62 118 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 FAM90A27PA6NNH2 459 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 CXCR6O00574 342 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 ADAMDEC1O15204 470 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 EFNA2O43921 213 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 AGAP20933 346 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 CD247P20963 164 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 CXCR1P25024 350 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 TIMP3P35625 211 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 KCNJ5P48544 419 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 DUSP7Q16829 419 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 ADGRE4PQ86SQ3 457 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 DEFB107AQ8IZN7 70 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 GPR32P1Q8NGA4 272 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 OR52E4Q8NGH9 312 aa13.32□□□□□ -0.28
COL9A1-204ENST00000370496 VANGL1Q8TAA9 524 aaPredicted RBP13.32□□□□□ -0.28
COL9A1-204ENST00000370496 FNDC9Q8TBE3 224 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms