RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 PMS2P1A4D2B8 440 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 BET1O15155 118 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 CTDSPLO15194 276 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 TPD52L2O43399 206 aaKnown RBP10.66□□□□□ -0.7
USF1-201ENST00000368019 LALBAP00709 142 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 ELK1P19419 428 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 C4BPBP20851 252 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 PBLDP30039 288 aaPredicted RBP10.66□□□□□ -0.7
USF1-201ENST00000368019 SSTR4P31391 388 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 TSFMP43897 325 aaKnown RBP10.66□□□□□ -0.7
USF1-201ENST00000368019 AVPR1BP47901 424 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 PITPNBP48739 271 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 PDX1P52945 283 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 TAS2R41P59536 307 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 YPEL5P62699 121 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 HSF2Q03933 536 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 RGS1Q08116 209 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 HSPB3Q12988 150 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 NFE2L1Q14494 772 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 NR0B2Q15466 257 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 CEBPEQ15744 281 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 KLHL12Q53G59 568 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 PRRT3Q5FWE3 981 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 ZNF311Q5JNZ3 666 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 C6orf132Q5T0Z8 1188 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 VASNQ6EMK4 673 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 SMARCD3Q6STE5 483 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 TEX261Q6UWH6 196 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 ZNF620Q6ZNG0 422 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 TMEM91Q6ZNR0 172 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 AMIGO1Q86WK6 493 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 TP53I13Q8NBR0 393 aaPredicted RBP10.66□□□□□ -0.7
USF1-201ENST00000368019 BRIX1Q8TDN6 353 aaKnown RBP10.66□□□□□ -0.7
USF1-201ENST00000368019 SPRYD4Q8WW59 207 aaPredicted RBP10.66□□□□□ -0.7
USF1-201ENST00000368019 AMDHD1Q96NU7 426 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 SORCS2Q96PQ0 1159 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 SECISBP2Q96T21 854 aaKnown RBP10.66□□□□□ -0.7
USF1-201ENST00000368019 GPA33Q99795 319 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 THAP7Q9BT49 309 aaPredicted RBP10.66□□□□□ -0.7
USF1-201ENST00000368019 WACQ9BTA9 647 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 LRRC61Q9BV99 259 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 SEMA4CQ9C0C4 833 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 GALNT9Q9HCQ5 603 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 LHX9Q9NQ69 397 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 TRIM36Q9NQ86 728 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 SLC35C2Q9NQQ7 365 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 MBNL1Q9NR56 388 aaKnown RBP10.66□□□□□ -0.7
USF1-201ENST00000368019 ZCCHC3Q9NUD5 404 aaKnown RBP10.66□□□□□ -0.7
USF1-201ENST00000368019 KLHL28Q9NXS3 571 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 H2AFY2Q9P0M6 372 aaPredicted RBP10.66□□□□□ -0.7
USF1-201ENST00000368019 ABRACLQ9P1F3 81 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 TNFRSF10DQ9UBN6 386 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 APOBEC3BQ9UH17 382 aaKnown RBP10.66□□□□□ -0.7
USF1-201ENST00000368019 SLC13A4Q9UKG4 626 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 NPTNQ9Y639 398 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 U3KQ87 197 aa10.66□□□□□ -0.7
USF1-201ENST00000368019 LOC102723532A0A0G2JNH3 316 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 K7ENP7 123 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 NTN3O00634 580 aaPredicted RBP10.65□□□□□ -0.7
USF1-201ENST00000368019 PLPP2O43688 288 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 GSTZ1O43708 216 aaPredicted RBP10.65□□□□□ -0.7
USF1-201ENST00000368019 PLOD3O60568 738 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 PRAF2O60831 178 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 POP7O75817 140 aaKnown RBP10.65□□□□□ -0.7
USF1-201ENST00000368019 AGR2O95994 175 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 IFNA7P01567 189 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 CD1AP06126 327 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 CHRM4P08173 479 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 POLR2CP19387 275 aaPredicted RBP10.65□□□□□ -0.7
USF1-201ENST00000368019 CELP19835 753 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 EVI2BP34910 448 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 THBS2P35442 1172 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 AGFG1P52594 562 aaKnown RBP10.65□□□□□ -0.7
USF1-201ENST00000368019 PRR5P85299 388 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 MEF2AQ02078 507 aaPredicted RBP10.65□□□□□ -0.7
USF1-201ENST00000368019 FUT5Q11128 374 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 MAP4K2Q12851 820 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 C1orf61Q13536 156 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 DYRK1AQ13627 763 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 TMEM52BQ4KMG9 183 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 LRRC73Q5JTD7 316 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 TOR2AQ5JU69 321 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 OR4C11Q6IEV9 310 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 INO80CQ6PI98 192 aaPredicted RBP10.65□□□□□ -0.7
USF1-201ENST00000368019 LYPD8Q6UX82 237 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 WASH2PQ6VEQ5 465 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 MBOAT2Q6ZWT7 520 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 RRM2BQ7LG56 351 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 ADCK2Q7Z695 626 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 COMTD1Q86VU5 262 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 MMP21Q8N119 569 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 RAB42Q8N4Z0 105 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 ACBD7Q8N6N7 88 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 ZNF740Q8NDX6 193 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 OR4Q3Q8NH05 313 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 SLC2A12Q8TD20 617 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 ZNF431Q8TF32 576 aaPredicted RBP10.65□□□□□ -0.7
USF1-201ENST00000368019 XAGE5Q8WWM1 108 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 NAT6Q93015 286 aa10.65□□□□□ -0.7
USF1-201ENST00000368019 EXOSC8Q96B26 276 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms