RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 KLBQ86Z14 1044 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 SAMD14Q8IZD0 417 aaPredicted RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 OR2L3Q8NG85 312 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 OR52E1Q8NGJ3 308 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 OR14C36Q8NHC7 312 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 ADAMTS14Q8WXS8 1223 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 SLC41A3Q96GZ6 507 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 MS4A3Q96HJ5 214 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 ZNF578Q96N58 590 aaPredicted RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 MCHR1Q99705 422 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 PRDM9Q9NQV7 894 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 PTGFRNQ9P2B2 879 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 TNFRSF10DQ9UBN6 386 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 APOBEC3BQ9UH17 382 aaKnown RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 SCP2D1Q9UJQ7 156 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 MAB21L2Q9Y586 359 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 ZNF780BQ9Y6R6 833 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 TSPAN4O14817 238 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 RNF13O43567 381 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 SOX30O94993 753 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 GBX2P52951 348 aaPredicted RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 GSG1Q2KHT4 349 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 ZNF425Q6IV72 752 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 CDC73Q6P1J9 531 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 SMARCD3Q6STE5 483 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 NRROSQ86YC3 692 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 MS4A15Q8N5U1 240 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 SIRT6Q8N6T7 355 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 ZFPM2Q8WW38 1151 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 WBP1Q96G27 269 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 INPP5EQ9NRR6 644 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 PHPT1Q9NRX4 125 aaPredicted RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 H2AFY2Q9P0M6 372 aaPredicted RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 USP36Q9P275 1121 aaKnown RBP13.61□□□□□ -0.23
PRKN-204ENST00000366896 COPZ2Q9P299 210 aa13.61□□□□□ -0.23
PRKN-204ENST00000366896 A0A1B0GVC2 190 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 A0A1W2PPL8 197 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 TUBAL3A6NHL2 446 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 A6NIN4 97 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 FAM183AA6NL82 134 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 ATP6V1G2-DDX39BF2Z307 99 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 CDC42EP2O14613 210 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 PEPDP12955 493 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 RAG2P55895 527 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 ST3GAL2Q16842 350 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 GARNL3Q5VVW2 1013 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 FAM111BQ6SJ93 734 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 FRRS1Q6ZNA5 592 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 RNF113BQ8IZP6 322 aaKnown RBP13.6□□□□□ -0.23
PRKN-204ENST00000366896 PIAS4Q8N2W9 510 aaPredicted RBP13.6□□□□□ -0.23
PRKN-204ENST00000366896 NPTNQ9Y639 398 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 TECTAO75443 2155 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 CENPVL1A0A0U1RR11 272 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 ZC3H12DA2A288 527 aaKnown RBP13.6□□□□□ -0.23
PRKN-204ENST00000366896 RNGTTO60942 597 aaKnown RBP13.6□□□□□ -0.23
PRKN-204ENST00000366896 SERPINI2O75830 405 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 PAK4O96013 591 aaPredicted RBP13.6□□□□□ -0.23
PRKN-204ENST00000366896 THBS1P07996 1170 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 GIFP27352 417 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 CAPZA2P47755 286 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 KRT33BQ14525 404 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 TRAM1Q15629 374 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 EIPR1Q53HC9 387 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 TMEM81Q6P7N7 255 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 FGD2Q7Z6J4 655 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 ACBD7Q8N6N7 88 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 ADAMTS15Q8TE58 950 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 SLC35A4Q96G79 324 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 AHCYL2Q96HN2 611 aaKnown RBP13.6□□□□□ -0.23
PRKN-204ENST00000366896 C10orf90Q96M02 699 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 KLHL15Q96M94 604 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 MS4A4EQ96PG1 132 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 ISG20L2Q9H9L3 353 aaKnown RBP13.6□□□□□ -0.23
PRKN-204ENST00000366896 HINT3Q9NQE9 182 aaKnown RBP13.6□□□□□ -0.23
PRKN-204ENST00000366896 BABAM2Q9NXR7 383 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 RDH8Q9NYR8 311 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 RASD1Q9Y272 281 aa13.6□□□□□ -0.23
PRKN-204ENST00000366896 ZNF443Q9Y2A4 671 aaPredicted RBP13.6□□□□□ -0.23
PRKN-204ENST00000366896 G3V3Q6 166 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 IGLV3-19P01714 112 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 FUT1P19526 365 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 MAP2K6P52564 334 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 CRYZQ08257 329 aaKnown RBP13.59□□□□□ -0.23
PRKN-204ENST00000366896 TMEM31Q5JXX7 168 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 MFSD12Q6NUT3 480 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 TOMM5Q8N4H5 51 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 FCRL4Q96PJ5 515 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 C1QTNF2Q9BXJ5 285 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 CACNG6Q9BXT2 260 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 UBQLN3Q9H347 655 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 KIF25Q9UIL4 384 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 UGT2B7P16662 529 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 ZP3P21754 424 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 F8A1P23610 371 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 CMPK1P30085 196 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 VSX2P58304 361 aaPredicted RBP13.59□□□□□ -0.23
PRKN-204ENST00000366896 DUSP8Q13202 625 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 ARHGAP11BQ3KRB8 267 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 RPL13AP3Q6NVV1 102 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 SFXN4Q6P4A7 337 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms