RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 PSMB1P20618 241 aaKnown RBP11.09□□□□□ -0.63
MRPL55-209ENST00000366735 LOXP28300 417 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-209ENST00000366735 S100A3P33764 101 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 GABRA3P34903 492 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 RPL3P39023 403 aaKnown RBP11.09□□□□□ -0.63
MRPL55-209ENST00000366735 RAC1P63000 192 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 TMEM44Q2T9K0 475 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 TRMT5Q32P41 509 aaKnown RBP11.09□□□□□ -0.63
MRPL55-209ENST00000366735 GRAMD1BQ3KR37 738 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 FAM174BQ3ZCQ3 159 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 TIGD2Q4W5G0 525 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 STAC2Q6ZMT1 411 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 PRIMA1Q86XR5 153 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 WFDC8Q8IUA0 241 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 GTPBP8Q8N3Z3 284 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-209ENST00000366735 OR2V1Q8NHB1 315 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 LRRC58Q96CX6 371 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 ZBED6CLQ96FA7 236 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-209ENST00000366735 PLPPR2Q96GM1 343 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 MS4A4EQ96PG1 132 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 TSSK3Q96PN8 268 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 CDRT15Q96T59 188 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 HDHD5Q9BXW7 423 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 RASSF4Q9H2L5 321 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 DENND2DQ9H6A0 471 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-209ENST00000366735 SPAG4Q9NPE6 437 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 ZNF701Q9NV72 531 aaPredicted RBP11.09□□□□□ -0.63
MRPL55-209ENST00000366735 TMEM181Q9P2C4 612 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 ABCD2Q9UBJ2 740 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 SLC7A8Q9UHI5 535 aa11.09□□□□□ -0.63
MRPL55-209ENST00000366735 TLN2Q9Y4G6 2542 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 GJE1A6NN92 205 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 SCDO00767 359 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 CXCL13O43927 109 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 OXSR1O95747 527 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-209ENST00000366735 TP53P04637 393 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-209ENST00000366735 ELK4P28324 431 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 HPCAL1P37235 193 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 EIF1P41567 113 aaKnown RBP11.08□□□□□ -0.64
MRPL55-209ENST00000366735 NFYCQ13952 458 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 VEZF1Q14119 521 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 RNPS1Q15287 305 aaKnown RBP11.08□□□□□ -0.64
MRPL55-209ENST00000366735 PAGE3Q5JUK9 113 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 SPANXN4Q5MJ08 99 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 TMEM201Q5SNT2 666 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 HBMQ6B0K9 141 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 DLEU7Q6UYE1 221 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 ARPINQ7Z6K5 226 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 OR8J2Q8NGG1 315 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 CLHC1Q8NHS4 586 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 SLC9A6Q92581 669 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 FBXW5Q969U6 566 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 CPNE4Q96A23 557 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-209ENST00000366735 COQ8BQ96D53 544 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 MTERF3Q96E29 417 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 ZNF764Q96H86 408 aaPredicted RBP11.08□□□□□ -0.64
MRPL55-209ENST00000366735 CLPTM1LQ96KA5 538 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 EGLN2Q96KS0 407 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 ESRP2Q9H6T0 727 aaKnown RBP11.08□□□□□ -0.64
MRPL55-209ENST00000366735 ATP6V1HQ9UI12 483 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 CLEC4AQ9UMR7 237 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 DNHD1Q96M86 4753 aa11.08□□□□□ -0.64
MRPL55-209ENST00000366735 FREM1Q5H8C1 2179 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 ROS1P08922 2347 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 USF3Q68DE3 2245 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 A0A1W2PQD3 144 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 A0A1W2PRB8 838 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 KIAA1324LA8MWY0 1029 aaPredicted RBP11.07□□□□□ -0.64
MRPL55-209ENST00000366735 SHISA8B8ZZ34 492 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 TNFSF11O14788 317 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 SCAMP2O15127 329 aaKnown RBP11.07□□□□□ -0.64
MRPL55-209ENST00000366735 ADAMDEC1O15204 470 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 KLF4O43474 513 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 TBX19O60806 448 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 NKX2-2O95096 273 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 RPLP1P05386 114 aaKnown RBP11.07□□□□□ -0.64
MRPL55-209ENST00000366735 THBDP07204 575 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 SLC6A2P23975 617 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 IL32P24001 234 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 AGTR1P30556 359 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 ACTR3P61158 418 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 PHC1P78364 1004 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 LRRC74AQ0VAA2 488 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 PDE7AQ13946 482 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 CEACAM7Q14002 265 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.07□□□□□ -0.64
MRPL55-209ENST00000366735 PLPPR5Q32ZL2 321 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 SAMD4BQ5PRF9 694 aaKnown RBP11.07□□□□□ -0.64
MRPL55-209ENST00000366735 CPTPQ5TA50 214 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 ZCCHC12Q6PEW1 402 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 CXXC5Q7LFL8 322 aaKnown RBP11.07□□□□□ -0.64
MRPL55-209ENST00000366735 R3HCC1LQ7Z5L2 792 aaKnown RBP11.07□□□□□ -0.64
MRPL55-209ENST00000366735 DHDDSQ86SQ9 333 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 GALNT10Q86SR1 603 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 ZNF527Q8NB42 609 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 NUP43Q8NFH3 380 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 SPATA3Q8NHX4 192 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 PIK3R3Q92569 461 aa11.07□□□□□ -0.64
MRPL55-209ENST00000366735 AKAP1Q92667 903 aaKnown RBP eCLIP11.07□□□□□ -0.64
MRPL55-209ENST00000366735 GTF2H4Q92759 462 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms