RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ECI2O75521 394 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 KIAA0754O94854 1291 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 OR4F21O95013 312 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 CA1P00915 261 aaPredicted RBP2.56□□□□□ -2
RNU4-28P-201ENST00000364739 OPN1LWP04000 364 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 CYP2B6P20813 491 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 HNRNPA2B1P22626 353 aaKnown RBP2.56□□□□□ -2
RNU4-28P-201ENST00000364739 ADRA1AP35348 466 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 STARD6P59095 220 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 HERVK_113P61574 105 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 EWSR1Q01844 656 aaKnown RBP eCLIP2.56□□□□□ -2
RNU4-28P-201ENST00000364739 RIPPLY1Q0D2K3 151 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 OR52W1Q6IF63 320 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 CENPUQ71F23 418 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 C16orf62Q7Z3J2 963 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 TMEM17Q86X19 198 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 MISPQ8IVT2 679 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 AKR1E2Q96JD6 320 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 SPXQ9BT56 116 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 SLC25A22Q9H936 323 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 NGBQ9NPG2 151 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 MGAT4BQ9UQ53 548 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 MAP3K15Q6ZN16 1313 aa2.56□□□□□ -2
RNU4-28P-201ENST00000364739 PHF3Q92576 2039 aaKnown RBP2.56□□□□□ -2
RNU4-28P-201ENST00000364739 IGHV3-64DA0A0J9YX35 117 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 P04436 131 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 CD80P33681 288 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 RPS9P46781 194 aaKnown RBP2.55□□□□□ -2
RNU4-28P-201ENST00000364739 PLK1P53350 603 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 NAPAP54920 295 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 SH3BGRP55822 239 aaPredicted RBP2.55□□□□□ -2
RNU4-28P-201ENST00000364739 HSF2Q03933 536 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 TOR1AIP1Q5JTV8 583 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 CASC10Q5T4H9 136 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 RAB12Q6IQ22 244 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 CCDC137Q6PK04 289 aaKnown RBP2.55□□□□□ -2
RNU4-28P-201ENST00000364739 UNC5DQ6UXZ4 953 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 TICAM2Q86XR7 235 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 GCNT2Q8N0V5 402 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 KIR3DL3Q8N743 410 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 NKAPP1Q8N9T2 125 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 PNPT1Q8TCS8 783 aaKnown RBP2.55□□□□□ -2
RNU4-28P-201ENST00000364739 SELENOMQ8WWX9 145 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 RAPGEF5Q92565 580 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 RPL3LQ92901 407 aaKnown RBP2.55□□□□□ -2
RNU4-28P-201ENST00000364739 SLC6A7Q99884 636 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 NRIP2Q9BQI9 281 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 PELOQ9BRX2 385 aaKnown RBP2.55□□□□□ -2
RNU4-28P-201ENST00000364739 RBAKQ9NYW8 714 aaPredicted RBP2.55□□□□□ -2
RNU4-28P-201ENST00000364739 C6orf203Q9P0P8 240 aaPredicted RBP2.55□□□□□ -2
RNU4-28P-201ENST00000364739 ASF1AQ9Y294 204 aa2.55□□□□□ -2
RNU4-28P-201ENST00000364739 SLIT3O75094 1523 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 CARMIL1Q5VZK9 1371 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 IGKV1D-8A0A087WSZ0 117 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 A6NIZ1 184 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 NBR2O15453 112 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 LANCL1O43813 399 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 PRKYO43930 277 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 LGI1O95970 557 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 CHTF8P0CG12 524 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 ZNF823P16415 610 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 KIF5BP33176 963 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 KLK7P49862 253 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 PRKXP51817 358 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 CRISP3P54108 245 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 HSPA2P54652 639 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 RAP1BP61224 184 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 SELENOTP62341 195 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 NUCB2P80303 420 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 SLAQ13239 276 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 NRF1Q16656 503 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 ZNF311Q5JNZ3 666 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 C12orf60Q5U649 245 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 NIPAL3Q6P499 406 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 COX15Q7KZN9 410 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 DPY19L4Q7Z388 723 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 SAXO1Q8IYX7 474 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 C6orf223Q8N319 242 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 SVOPLQ8N434 492 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 C15orf54Q8N8G6 183 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 DUSP18Q8NEJ0 188 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 OR8H1Q8NGG4 311 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 OR5L2Q8NGL0 311 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 C14orf79Q96F83 325 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 CEP170P1Q96L14 293 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 NAT10Q9H0A0 1025 aaKnown RBP2.54□□□□□ -2
RNU4-28P-201ENST00000364739 TBX21Q9UL17 535 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 B9D1Q9UPM9 204 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 ERVW-1Q9UQF0 538 aa2.54□□□□□ -2
RNU4-28P-201ENST00000364739 NCAPD2Q15021 1401 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 CLSPNQ9HAW4 1339 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 IGHV2-70DA0A0C4DH43 119 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 RASGRF2O14827 1237 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 DNAJB1P25685 340 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 ATP6V1E1P36543 226 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 C16orf72Q14CZ0 275 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 PSG5Q15238 335 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 SHHQ15465 462 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 NSUN5P1Q3KNT7 163 aa2.53□□□□□ -2
RNU4-28P-201ENST00000364739 PARP10Q53GL7 1025 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms