RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 NUP54Q7Z3B4 507 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF584Q8IVC4 421 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 CSNK1A1LQ8N752 337 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 ARRDC3Q96B67 414 aa12.95□□□□□ -0.34
COL6A1-201ENST00000361866 TMEM150CB9EJG8 249 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 GAPDHSO14556 408 aaPredicted RBP12.94□□□□□ -0.34
COL6A1-201ENST00000361866 HOXB2P14652 356 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 FRKP42685 505 aaPredicted RBP12.94□□□□□ -0.34
COL6A1-201ENST00000361866 FOXK2Q01167 660 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 OR5K2Q8NHB8 316 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 PFN4Q8NHR9 129 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 KIAA1143Q96AT1 154 aaPredicted RBP12.94□□□□□ -0.34
COL6A1-201ENST00000361866 BARHL1Q9BZE3 327 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF436Q9C0F3 470 aaPredicted RBP12.94□□□□□ -0.34
COL6A1-201ENST00000361866 SYT4Q9H2B2 425 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 CHMP1AQ9HD42 196 aaPredicted RBP12.94□□□□□ -0.34
COL6A1-201ENST00000361866 FBXL21Q9UKT6 434 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 EXO1Q9UQ84 846 aaKnown RBP12.94□□□□□ -0.34
COL6A1-201ENST00000361866 DOCK3Q8IZD9 2030 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 F5H5P2 479 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 H7C1C5 153 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 M0R036 132 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 LCMT2O60294 686 aaKnown RBP12.94□□□□□ -0.34
COL6A1-201ENST00000361866 DOK2O60496 412 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 ABLIM3O94929 683 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 TP53P04637 393 aaPredicted RBP12.94□□□□□ -0.34
COL6A1-201ENST00000361866 IL32P24001 234 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 ITGB7P26010 798 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 PBX2P40425 430 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 MTNR1BP49286 362 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 UBE2MP61081 183 aaKnown RBP12.94□□□□□ -0.34
COL6A1-201ENST00000361866 LCN6P62502 163 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 SORDQ00796 357 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 HTR4Q13639 388 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 PDE7AQ13946 482 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 GLT8D1Q68CQ7 371 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 LYPD8Q6UX82 237 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 GPR155Q7Z3F1 870 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF511Q8NB15 262 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 TMEM185AQ8NFB2 350 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 GPR32P1Q8NGA4 272 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 ZG16BQ96DA0 208 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 SFXN2Q96NB2 322 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 LYSMD1Q96S90 227 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 ARPC5LQ9BPX5 153 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 GSX2Q9BZM3 304 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 PPA2Q9H2U2 334 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 ZMAT3Q9HA38 289 aaKnown RBP12.94□□□□□ -0.34
COL6A1-201ENST00000361866 NOX4Q9NPH5 578 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 GPR34Q9UPC5 381 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 UBL3O95164 117 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 F13BP05160 661 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 EIF4EP06730 217 aaKnown RBP12.94□□□□□ -0.34
COL6A1-201ENST00000361866 TMEM17Q86X19 198 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 SEC22AQ96IW7 307 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 NMNAT3Q96T66 252 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 ZDHHC5Q9C0B5 715 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 PLEKHM1Q9Y4G2 1056 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 PIKFYVEQ9Y2I7 2098 aa12.94□□□□□ -0.34
COL6A1-201ENST00000361866 KCNE1BA0A087WTH5 132 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 A0A1B0GV50 99 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 TMEM72A0PK05 275 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF878C9JN71 531 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ACOT7O00154 380 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 AGPAT2O15120 278 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 VASPP50552 380 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-201ENST00000361866 METAP1P53582 386 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 DLX5P56178 289 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 CSNK1G2P78368 415 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 GPM6BQ13491 265 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 TPBGQ13641 420 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ALG11Q2TAA5 492 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 MBOAT2Q6ZWT7 520 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF619Q8N2I2 560 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 CDRT4Q8N9R6 151 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ADAMTS14Q8WXS8 1223 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 RAD9AQ99638 391 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 TAPBPLQ9BX59 468 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 SLC17A9Q9BYT1 436 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 DHDHQ9UQ10 334 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 HIDE1A8MVS5 230 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 SFTPBP07988 381 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 S1PR1P21453 382 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 SOX9P48436 509 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 RNASE10Q5GAN6 216 aaKnown RBP12.93□□□□□ -0.34
COL6A1-201ENST00000361866 BAIAP2L2Q6UXY1 529 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 TTLL10Q6ZVT0 673 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ABI3BPQ7Z7G0 1075 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 CD163Q86VB7 1156 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 NEK7Q8TDX7 302 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 THAP3Q8WTV1 239 aaPredicted RBP12.93□□□□□ -0.34
COL6A1-201ENST00000361866 RAB7BQ96AH8 199 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ASF1BQ9NVP2 202 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 B3GNT2Q9NY97 397 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ERVK-19Q9WJR5 959 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 SCO2O43819 266 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 CDC40O60508 579 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL6A1-201ENST00000361866 RAB3DO95716 219 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ZNF20P17024 532 aa12.93□□□□□ -0.34
COL6A1-201ENST00000361866 ANXA7P20073 488 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms