RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 IL26Q9NPH9 171 aa12.44□□□□□ -0.42
SRGAP3-201ENST00000360413 SRPK3Q9UPE1 567 aa12.44□□□□□ -0.42
SRGAP3-201ENST00000360413 PLSCR1O15162 318 aa12.44□□□□□ -0.42
SRGAP3-201ENST00000360413 DHRS4L1P0CG22 281 aa12.44□□□□□ -0.42
SRGAP3-201ENST00000360413 TIA1P31483 386 aaKnown RBP eCLIP12.44□□□□□ -0.42
SRGAP3-201ENST00000360413 MCATQ8IVS2 390 aaKnown RBP12.44□□□□□ -0.42
SRGAP3-201ENST00000360413 BCL9O00512 1426 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 SLC22A23A1A5C7 686 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 SRPX2O60687 465 aaPredicted RBP12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 DPM1O60762 260 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 ADRB1P08588 477 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 NME2P22392 152 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 GIPRP48546 466 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 RBMS2Q15434 407 aaKnown RBP12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 ACSM3Q53FZ2 586 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 TMEM107Q6UX40 140 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 ZNF689Q96CS4 500 aaPredicted RBP12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 PIGVQ9NUD9 493 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 NLE1Q9NVX2 485 aaPredicted RBP12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 ALX3O95076 343 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 CER1O95813 267 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 SERPINA5P05154 406 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 CD99L2Q8TCZ2 262 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 SLC29A1Q99808 456 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 VRTNQ9H8Y1 702 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 MTHFD2LQ9H903 347 aaPredicted RBP12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 MRPL22Q9NWU5 206 aaKnown RBP12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 ANHXE9PGG2 379 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 GSK3AP49840 483 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 CLDN6P56747 220 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 BAK1Q16611 211 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 ZNF691Q5VV52 312 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 TANKQ92844 425 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 SLC6A17Q9H1V8 727 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 CHRDQ9H2X0 955 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 ISYNA1Q9NPH2 558 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 BOLA1Q9Y3E2 137 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 OR1A2Q9Y585 309 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 SURF4O15260 269 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 CXADRP78310 365 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 ZNF852Q6ZMS4 543 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 CMTM2Q8TAZ6 248 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 METTL2AQ96IZ6 378 aaKnown RBP12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 MYADMQ96S97 322 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 NME4O00746 187 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 CRHBPP24387 322 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 CTSL3PQ5NE16 218 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 FJX1Q86VR8 437 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 C1orf87Q8N0U7 546 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 NETO1Q8TDF5 533 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 ASB17Q8WXJ9 295 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 ST8SIA4Q92187 359 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 BOKQ9UMX3 212 aaPredicted RBP12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 DCDC2BA2VCK2 349 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 LILRB3O75022 631 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 SULT1C4O75897 302 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 TNFRSF1BP20333 461 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 IRF4Q15306 451 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 FBXL4Q9UKA2 621 aa12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 XRN1Q8IZH2 1706 aaKnown RBP12.43□□□□□ -0.42
SRGAP3-201ENST00000360413 SEC14L6B5MCN3 397 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 GPR39O43194 453 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 MPC1LP0DKB6 136 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 MS4A2Q01362 244 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 ZNF551Q7Z340 670 aaPredicted RBP12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 CELF2-AS1Q8N7Q2 184 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 FBXO27Q8NI29 283 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 MS4A4EQ96PG1 132 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 IFT22Q9H7X7 185 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 DYNLRB1Q9NP97 96 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 EMC7Q9NPA0 242 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 FAM155AB1AL88 458 aaPredicted RBP12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 RGS11O94810 467 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 TBPP20226 339 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 CNR1P21554 472 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 SOWAHAQ2M3V2 549 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 ADAM5Q6NVV9 412 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 SCAMP5Q8TAC9 235 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 KLRG1Q96E93 195 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 AGPAT4Q9NRZ5 378 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 ZDHHC7Q9NXF8 308 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 YIPF1Q9Y548 306 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 MPIG6BO95866 241 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 GABRB3P28472 473 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 S100A11P31949 105 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 KIR2DL3P43628 341 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 SYPL2Q5VXT5 272 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 FCRLBQ6BAA4 426 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 H3F3CQ6NXT2 135 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 GCNT2Q8N0V5 402 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 CAPNS2Q96L46 248 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 NKX3-1Q99801 234 aaPredicted RBP12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 KCNK12Q9HB15 430 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 ZNF160Q9HCG1 818 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 FTSJ1Q9UET6 329 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 SLIT2O94813 1529 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 MSTNO14793 375 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 FZD7O75084 574 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 ITGAMP11215 1152 aa12.42□□□□□ -0.42
SRGAP3-201ENST00000360413 HLA-DOBP13765 273 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms