RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 IRF3Q14653 427 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 PTCHD4Q6ZW05 846 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 KCTD20Q7Z5Y7 419 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 LINC00469Q8N7U9 141 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 OR52R1Q8NGF1 315 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 IL4I1Q96RQ9 567 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 MCHR1Q99705 422 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 NDC1Q9BTX1 674 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 CCDC59Q9P031 241 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 PEX16Q9Y5Y5 336 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 A0A087WUU8 490 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 NID1P14543 1247 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 GABRA3P34903 492 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 ETV5P41161 510 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 OR2B6P58173 313 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 ZNHIT3Q15649 155 aaPredicted RBP12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 GPR68Q15743 365 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 DECR1Q16698 335 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 PPP1R3BQ86XI6 285 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 RIT1Q92963 219 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 MGLLQ99685 303 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 CMKLR1Q99788 373 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 PELOQ9BRX2 385 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 CNOT2Q9NZN8 540 aaKnown RBP12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 LOXL2Q9Y4K0 774 aa12.78□□□□□ -0.36
CSNK1E-201ENST00000359867 ATP6V1G2-DDX39BF2Z307 99 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 H3BN98 237 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 BRINP1O60477 761 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 SCRG1O75711 98 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 GPX5O75715 221 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 TP53P04637 393 aaPredicted RBP12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 IGFBP1P08833 259 aaPredicted RBP12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 SOX3P41225 446 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 GCGRP47871 477 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 ZNF155Q12901 538 aaPredicted RBP12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 CCNJQ5T5M9 372 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 DGAT2L6Q6ZPD8 337 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 PLEKHM3Q6ZWE6 761 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 MED25Q71SY5 747 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 NRARPQ7Z6K4 114 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 DOK4Q8TEW6 326 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 PIK3R3Q92569 461 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 DGAT2Q96PD7 388 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 SPTBN2O15020 2390 aa12.77□□□□□ -0.36
CSNK1E-201ENST00000359867 A0A1W2PNU3 283 aaPredicted RBP12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 EFCAB10A6NFE3 127 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 CPSF4LA6NMK7 179 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 FRS3O43559 492 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 CDC123O75794 336 aaPredicted RBP12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 APOA1P02647 267 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 CSRP1P21291 193 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 CFL1P23528 166 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 TRHRP34981 398 aaPredicted RBP12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 SOX6P35712 828 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 SLC9A3P48764 834 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 DEFA1P59665 94 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 DEFA3P59666 94 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 TAGLNQ01995 201 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 SERTAD2Q14140 314 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 TAB1Q15750 504 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 SSX1Q16384 188 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 TMEM201Q5SNT2 666 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 AGAP6Q5VW22 663 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 CASP12Q6UXS9 341 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 RAB11FIP2Q7L804 512 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 RRM2BQ7LG56 351 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 BCDIN3DQ7Z5W3 292 aaKnown RBP12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 RANBP3LQ86VV4 465 aaPredicted RBP12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 ACOT11Q8WXI4 607 aaPredicted RBP12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 MVB12AQ96EY5 273 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 AGAP4Q96P64 663 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 STRADBQ9C0K7 418 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 RERGLQ9H628 205 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 CTPS2Q9NRF8 586 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 TBC1D24Q9ULP9 559 aa12.77□□□□□ -0.37
CSNK1E-201ENST00000359867 OR2W5A6NFC9 320 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 TGFBR3LH3BV60 316 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 WWP2O00308 870 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 TFECO14948 347 aaPredicted RBP12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 SOX14O95416 240 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 ZNF28P17035 718 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 TNFSF8P32971 234 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 TSPAN31Q12999 210 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 ERV3-1Q14264 604 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 ZNF730Q6ZMV8 503 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 OR8J1Q8NGP2 316 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 OR51Q1Q8NH59 317 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 SLC41A3Q96GZ6 507 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 FOLH1BQ9HBA9 442 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 CLDN16Q9Y5I7 305 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 ASPMQ8IZT6 3477 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 SMIM30A4D0T7 59 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 FMO6PO60774 539 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 SLC15A1P46059 708 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 EMDP50402 254 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 ZNF136P52737 540 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 FOXL2P58012 376 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 MXD1Q05195 221 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 MAPK14Q16539 360 aa12.76□□□□□ -0.37
CSNK1E-201ENST00000359867 ZFP69Q49AA0 526 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms