RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 GRINAQ7Z429 371 aa11.23□□□□□ -0.61
NIF3L1-201ENST00000359683 GTPBP8Q8N3Z3 284 aaPredicted RBP11.23□□□□□ -0.61
NIF3L1-201ENST00000359683 NR4A3Q92570 626 aa11.23□□□□□ -0.61
NIF3L1-201ENST00000359683 C3orf49Q96BT1 292 aa11.23□□□□□ -0.61
NIF3L1-201ENST00000359683 ZNF347Q96SE7 839 aa11.23□□□□□ -0.61
NIF3L1-201ENST00000359683 YY1AP1Q9H869 796 aa11.23□□□□□ -0.61
NIF3L1-201ENST00000359683 C12orf10Q9HB07 376 aa11.23□□□□□ -0.61
NIF3L1-201ENST00000359683 CTPS2Q9NRF8 586 aa11.23□□□□□ -0.61
NIF3L1-201ENST00000359683 RIMS3Q9UJD0 308 aa11.23□□□□□ -0.61
NIF3L1-201ENST00000359683 AP4S1Q9Y587 144 aa11.23□□□□□ -0.61
NIF3L1-201ENST00000359683 SPTA1P02549 2419 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 OR2M5A3KFT3 312 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 TFECO14948 347 aaPredicted RBP11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 EFNA2O43921 213 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 DIRAS1O95057 198 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 IGHG3P01860 377 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 MT-ND1P03886 318 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 THRBP10828 461 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 ZNF17P17021 662 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 TACR3P29371 465 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 APOBEC1P41238 236 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 CDH12P55289 794 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 TAS2R41P59536 307 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 FOXF1Q12946 379 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 CMPK2Q5EBM0 449 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 WIPI1Q5MNZ9 446 aaPredicted RBP11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 SWT1Q5T5J6 900 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 LINC00114Q6XXX2 140 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 GDF7Q7Z4P5 450 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 ATG4DQ86TL0 474 aaPredicted RBP11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 CYP4Z1Q86W10 505 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 ADGRG3Q86Y34 549 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 CISD2Q8N5K1 135 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 PIK3C3Q8NEB9 887 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 OR14L1PQ8NHC6 308 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 PYDC1Q8WXC3 89 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 SLC38A4Q969I6 547 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 SLC41A3Q96GZ6 507 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 DHRS1Q96LJ7 313 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 BARD1Q99728 777 aaKnown RBP11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 PIP5K1AQ99755 562 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 DEFB127Q9H1M4 99 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 RPS6KB2Q9UBS0 482 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 OSGIN1Q9UJX0 560 aa11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 RPH3AQ9Y2J0 694 aaPredicted RBP11.22□□□□□ -0.61
NIF3L1-201ENST00000359683 SHISA8B8ZZ34 492 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 H3BNX3 289 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 LINC01387J3KSC0 135 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 WISP2O76076 250 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 FUT4P22083 530 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 CHMP24386 653 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 IFNA8P32881 189 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 POLR2HP52434 150 aaKnown RBP11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 GFRA1P56159 465 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 ELF3P78545 371 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 ST3GAL3Q11203 375 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 MERTKQ12866 999 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 ALG10BQ5I7T1 473 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 COLEC12Q5KU26 742 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 AAGABQ6PD74 315 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 FAM180AQ6UWF9 173 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 TRILQ7L0X0 811 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 OFCC1Q8IZS5 231 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 OR5M1Q8NGP8 315 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 SNRNP40Q96DI7 357 aaKnown RBP11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 PRSS27Q9BQR3 290 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 PIGQQ9BRB3 760 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 FNDC11Q9BVV2 318 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 NMNAT1Q9HAN9 279 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 S100A14Q9HCY8 104 aa11.21□□□□□ -0.61
NIF3L1-201ENST00000359683 A0A087WUJ7 227 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 TMED7-TICAM2A0A0A6YYA0 188 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 A0A1B0GVC2 190 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 NPIPA5E9PKD4 350 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 HNRNPRO43390 633 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 CHP2O43745 196 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 SUSD5O60279 629 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 HCN1O60741 890 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 PNMTP11086 282 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 TCEA1P23193 301 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 ELK4P28324 431 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 MAP2K6P52564 334 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 HMGA2P52926 109 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 RAET1LQ5VY80 246 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 OR2T5Q6IEZ7 315 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 OR2T29Q8NH02 315 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 NEIL3Q8TAT5 605 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 FAR1Q8WVX9 515 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 MPP4Q96JB8 637 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 ZNF407Q9C0G0 2248 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 SLC6A15Q9H2J7 730 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 ANKRD19PQ9H560 264 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 MAN2C1Q9NTJ4 1040 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 SELENONQ9NZV5 590 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 RHCGQ9UBD6 479 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 SLC7A7Q9UM01 511 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 NPIPA1Q9UND3 350 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 TMED7Q9Y3B3 224 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 ZNF337Q9Y3M9 751 aa11.2□□□□□ -0.62
NIF3L1-201ENST00000359683 MED12Q93074 2177 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms