RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 LAG3P18627 525 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 PRDX3P30048 256 aaKnown RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 NDUFA6P56556 154 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 RPL23AP62750 156 aaKnown RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 CATSPEREQ5SY80 951 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 HENMT1Q5T8I9 393 aaKnown RBP8.24□□□□□ -1.09
COL6A6-201ENST00000358511 NLRC3Q7RTR2 1065 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 TM9SF4Q92544 642 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 SHPKQ9UHJ6 478 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 PKD1L3Q7Z443 1732 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 PIRO00625 290 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 LATO43561 262 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 CX3CR1P49238 355 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 OR4C11Q6IEV9 310 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 OR6N1Q8NGY5 312 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 BORCS7Q96B45 105 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 ACKR4Q9NPB9 350 aa8.24□□□□□ -1.09
COL6A6-201ENST00000358511 SLC9B1P1A6NJY1 282 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 SMPD1P17405 629 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 CASRP41180 1078 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 RNF144AP50876 292 aaPredicted RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 SELENOVP59797 346 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 SLC35A2P78381 396 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 GHRHRQ02643 423 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF322Q6U7Q0 402 aaPredicted RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 FCRLAQ7L513 359 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 CLEC14AQ86T13 490 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 MFSD6LQ8IWD5 586 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 FAM160A2Q8N612 972 aaPredicted RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 HCAR1Q9BXC0 346 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 SLC2A11Q9BYW1 496 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 RNF32Q9H0A6 362 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 HHATLQ9HCP6 504 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 GMEB2Q9UKD1 530 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 TRBV23OR9-2A0A075B6M9 112 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 NFKBIEO00221 500 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 SLC31A1O15431 190 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 CLDN6P56747 220 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 EIF2B1Q14232 305 aaKnown RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 PIP5KL1Q5T9C9 394 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 OR1S1Q8NH92 325 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 MIB2Q96AX9 1013 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 PGAM5Q96HS1 289 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 NEURL2Q9BR09 285 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 VPS25Q9BRG1 176 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 SMIM3Q9BZL3 60 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 TRBV4-1A0A0J9YWV2 114 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 MEIS3P2A8K0S8 358 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 HHLA1C9JL84 531 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 GPRIN2O60269 458 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 SLC1A3P43003 542 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 GDPD3Q7L5L3 318 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 FBXW5Q969U6 566 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 CBR1P16152 277 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 TAGLN2P37802 199 aaKnown RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 EXOSC2Q13868 293 aaKnown RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 RBM39Q14498 530 aaKnown RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 PGGHGQ32M88 737 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 OSTM1Q86WC4 334 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 OR51L1Q8NGJ5 315 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 OR5D14Q8NGL3 314 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF566Q969W8 418 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 KLRG1Q96E93 195 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 PLEKHJ1Q9NW61 149 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 TMEM212A6NML5 194 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 CXCL14O95715 111 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 CD1EP15812 388 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 C18orf21Q32NC0 220 aaPredicted RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 PITX2Q99697 317 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 SPHK1Q9NYA1 384 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 NENFQ9UMX5 172 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 MED12Q93074 2177 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 TNRC6CQ9HCJ0 1690 aaKnown RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 C20orf202A1L168 122 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 OR2F2O95006 317 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 PNPP00491 289 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 SERPINA7P05543 415 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 OR2F1Q13607 317 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 ZMAT1Q5H9K5 638 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 CYB561A3Q8NBI2 242 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 CYB5D2Q8WUJ1 264 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 HERVK_113Q902F9 699 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 MSLNLQ96KJ4 702 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF578Q96N58 590 aaPredicted RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 DIMT1Q9UNQ2 313 aaKnown RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 CORINQ9Y5Q5 1042 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 KPTNQ9Y664 436 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 TMEM235A6NFC5 223 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 I6L893 689 aaPredicted RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 JUNDP17535 347 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 RPS15AP62244 130 aaKnown RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 RPP30P78346 268 aaKnown RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 OC90Q02509 493 aaPredicted RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 ILKQ13418 452 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 AANATQ16613 207 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 LCN10Q6JVE6 187 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 PODNL1Q6PEZ8 512 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 RBM23Q86U06 439 aaKnown RBP8.23□□□□□ -1.09
COL6A6-201ENST00000358511 DYNC2LI1Q8TCX1 351 aa8.23□□□□□ -1.09
COL6A6-201ENST00000358511 TOMM40LQ969M1 308 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms