RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 AVL9Q8NBF6 648 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 OR52L1Q8NGH7 329 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 OR6F1Q8NGZ6 308 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 PFN4Q8NHR9 129 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 FANK1Q8TC84 345 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 RHBDD1Q8TEB9 315 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 ZNF486Q96H40 463 aaPredicted RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 TM9SF2Q99805 663 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 SOSTQ9BQB4 213 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 ZNF649Q9BS31 505 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 LMF2Q9BU23 707 aaKnown RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 DPH1Q9BZG8 443 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 OR52D1Q9H346 318 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 UBQLN3Q9H347 655 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 TIGARQ9NQ88 270 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 INPP5EQ9NRR6 644 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 C14orf105Q9NVL8 296 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 TNFRSF10DQ9UBN6 386 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 IL20RAQ9UHF4 553 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 ADAM30Q9UKF2 790 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 POU2F3Q9UKI9 436 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 YARS2Q9Y2Z4 477 aaKnown RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 KMT2BQ9UMN6 2715 aaPredicted RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 MAP1BP46821 2468 aaKnown RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 HMX3A6NHT5 357 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 SLC9B1P1A6NJY1 282 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 J3QRE1 110 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 CASKO14936 926 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 HLA-DQB1P01920 261 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 CSF3P09919 207 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 CD53P19397 219 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 AZGP1P25311 298 aaKnown RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 CD79BP40259 229 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 TGM4P49221 684 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 PLAURQ03405 335 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 RIN1Q13671 783 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 PRTGQ2VWP7 1150 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 SLC35F1Q5T1Q4 408 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 ZNF322Q6U7Q0 402 aaPredicted RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 CXXC5Q7LFL8 322 aaKnown RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 ZAR1Q86SH2 424 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 LHFPL3Q86UP9 236 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 RDH10Q8IZV5 341 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 BBS1Q8NFJ9 593 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 OR4F15Q8NGB8 312 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 DNAJA4Q8WW22 397 aaPredicted RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 ACOT12Q8WYK0 555 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 HS6ST2Q96MM7 605 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 DEPDC7Q96QD5 511 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 ZNF559Q9BR84 538 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 RBCK1Q9BYM8 510 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 OR2B2Q9GZK3 357 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 FOLH1BQ9HBA9 442 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 NEK6Q9HC98 313 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 HINT3Q9NQE9 182 aaKnown RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 SIDT1Q9NXL6 827 aaKnown RBP13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 HCN3Q9P1Z3 774 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 CSNK1G3Q9Y6M4 447 aa13.17□□□□□ -0.3
NIPAL3-203ENST00000358028 A0A0A6YYC8 382 aaPredicted RBP13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 SPAARA0A1B0GVQ0 90 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 CCDC182A6NF36 153 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 I3L1I5 382 aaPredicted RBP13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 SOCS6O14544 535 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 RGS13O14921 159 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 RCBTB2O95199 551 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 GUSBP08236 651 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 RNH1P13489 461 aaKnown RBP13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 S1PR1P21453 382 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 DRD5P21918 477 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 ATP6V1E1P36543 226 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 CAPZA2P47755 286 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 FXYD6P3P58550 94 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 DEFB133Q30KQ1 61 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 AMZ1Q400G9 498 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 PYDC2Q56P42 97 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 LCN1P1Q5VSP4 162 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 TMEM53Q6P2H8 277 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 ZNF613Q6PF04 617 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 CPOQ8IVL8 374 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 SLC43A2Q8N370 569 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 NEDD4LQ96PU5 975 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 SNX18Q96RF0 628 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 SECISBP2Q96T21 854 aaKnown RBP13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 CD180Q99467 661 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 TMEM27Q9HBJ8 222 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 C20orf141Q9NUB4 165 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 PTPRBP23467 1997 aa13.16□□□□□ -0.3
NIPAL3-203ENST00000358028 GABRPO00591 440 aa13.15□□□□□ -0.3
NIPAL3-203ENST00000358028 SIGLEC6O43699 453 aa13.15□□□□□ -0.3
NIPAL3-203ENST00000358028 SLC19A2O60779 497 aa13.15□□□□□ -0.3
NIPAL3-203ENST00000358028 CEACAM1P13688 526 aa13.15□□□□□ -0.3
NIPAL3-203ENST00000358028 FUT1P19526 365 aa13.15□□□□□ -0.3
NIPAL3-203ENST00000358028 RFX3P48380 749 aa13.15□□□□□ -0.3
NIPAL3-203ENST00000358028 ZNHIT3Q15649 155 aaPredicted RBP13.15□□□□□ -0.3
NIPAL3-203ENST00000358028 GARNL3Q5VVW2 1013 aa13.15□□□□□ -0.3
NIPAL3-203ENST00000358028 NIPAL3Q6P499 406 aa13.15□□□□□ -0.3
NIPAL3-203ENST00000358028 TMPRSS11FQ6ZWK6 438 aa13.15□□□□□ -0.3
NIPAL3-203ENST00000358028 MEPCEQ7L2J0 689 aaKnown RBP13.15□□□□□ -0.3
NIPAL3-203ENST00000358028 LSRQ86X29 649 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms