RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 CXCL3P19876 107 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 DNASE1P24855 282 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 PYCR1P32322 319 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 GBX2P52951 348 aaPredicted RBP16.37■□□□□ 0.21
RTN4-204ENST00000357732 AP3S2P59780 193 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 DGCR2P98153 550 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 CAMK1Q14012 370 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 CDK5R1Q15078 307 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 FHL5Q5TD97 284 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 VN1R4Q7Z5H5 301 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 OR13C2Q8NGS9 318 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 ZFPM2Q8WW38 1151 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 THAP4Q8WY91 577 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 MAP6Q96JE9 813 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 TMEM27Q9HBJ8 222 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 DLL4Q9NR61 685 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 SERTAD3Q9UJW9 196 aa16.37■□□□□ 0.21
RTN4-204ENST00000357732 TRPM6Q9BX84 2022 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 LOC105371267A0A1B0GV96 52 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 ADH1BP00325 375 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 CEACAM5P06731 702 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 ZNF888P0CJ79 500 aaPredicted RBP16.36■□□□□ 0.21
RTN4-204ENST00000357732 SMIM10L1P0DMW3 83 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 CPMP14384 443 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 ACVR1BP36896 505 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 PDGFRLQ15198 375 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 ELFN2Q5R3F8 820 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 RPL22L1Q6P5R6 122 aaKnown RBP16.36■□□□□ 0.21
RTN4-204ENST00000357732 C12orf76Q8N812 135 aaPredicted RBP16.36■□□□□ 0.21
RTN4-204ENST00000357732 COL26A1Q96A83 441 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 SLC22A18Q96BI1 424 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 SMIM10Q96HG1 83 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 IL23AQ9NPF7 189 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 BRD7Q9NPI1 651 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 OR52A4PA6NMU1 304 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 ZNF879B4DU55 563 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 GPRIN2O60269 458 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 GUSBP08236 651 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 CRMP1Q14194 572 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 CST6Q15828 149 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 ST3GAL2Q16842 350 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 SEZ6L2Q6UXD5 910 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 SPERTQ8NA61 448 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 ZNF527Q8NB42 609 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 OR5J2Q8NH18 312 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 LCORQ96JN0 433 aaPredicted RBP16.36■□□□□ 0.21
RTN4-204ENST00000357732 ERMAPQ96PL5 475 aaPredicted RBP16.36■□□□□ 0.21
RTN4-204ENST00000357732 RSPH9Q9H1X1 276 aaPredicted RBP16.36■□□□□ 0.21
RTN4-204ENST00000357732 MAT2BQ9NZL9 334 aa16.36■□□□□ 0.21
RTN4-204ENST00000357732 LOC105369274A0A096LPK9 316 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 ZNF593O00488 134 aaPredicted RBP16.35■□□□□ 0.21
RTN4-204ENST00000357732 KHNYNO15037 678 aaKnown RBP16.35■□□□□ 0.21
RTN4-204ENST00000357732 B3GALT2O43825 422 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 ATP1B1P05026 303 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 MRPL3P09001 348 aaKnown RBP16.35■□□□□ 0.21
RTN4-204ENST00000357732 C5AR1P21730 350 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 GDI2P50395 445 aaKnown RBP16.35■□□□□ 0.21
RTN4-204ENST00000357732 ILF3Q12906 894 aaKnown RBP eCLIP16.35■□□□□ 0.21
RTN4-204ENST00000357732 COL9A2Q14055 689 aaPredicted RBP16.35■□□□□ 0.21
RTN4-204ENST00000357732 LGALSLQ3ZCW2 172 aaPredicted RBP16.35■□□□□ 0.21
RTN4-204ENST00000357732 FAM78AQ5JUQ0 283 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 OR4N4Q8N0Y3 316 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 KCT2Q8NC54 265 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 FAM71CQ8NEG0 241 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 TM4SF19Q96DZ7 209 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 ZFP3Q96NJ6 502 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 ZNF426Q9BUY5 554 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 SYNPO2LQ9H987 977 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 NRIP3Q9NQ35 241 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 DAPP1Q9UN19 280 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 FKBP7Q9Y680 259 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 CENPVL1A0A0U1RR11 272 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 RPS10-NUDT3A0A1W2PQS6 291 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 PDCD5O14737 125 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 MID1O15344 667 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 SULT1B1O43704 296 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 SSNA1O43805 119 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 FUT1P19526 365 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 NOS3P29474 1203 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 RAB14P61106 215 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 MRPS10P82664 201 aaKnown RBP16.35■□□□□ 0.21
RTN4-204ENST00000357732 HTRA3P83110 453 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 CDONQ4KMG0 1287 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 SMUG1Q53HV7 270 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 COX18Q8N8Q8 333 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 LRRC20Q8TCA0 184 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 MYADMQ96S97 322 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 GSDMCQ9BYG8 508 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 ZNF436Q9C0F3 470 aaPredicted RBP16.35■□□□□ 0.21
RTN4-204ENST00000357732 C20orf85Q9H1P6 137 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 LYRM4Q9HD34 91 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 NANSQ9NR45 359 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 PCDHGA9Q9Y5G4 932 aaKnown RBP16.35■□□□□ 0.21
RTN4-204ENST00000357732 SLC22A7Q9Y694 548 aa16.35■□□□□ 0.21
RTN4-204ENST00000357732 A0A0B4J2E0 115 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 A0A1B0GVC2 190 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 A0A1B0GX12 115 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 A6NIN4 97 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 TPPPO94811 219 aa16.34■□□□□ 0.21
RTN4-204ENST00000357732 DRD5P21918 477 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms