RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 NPIPA7E9PJI5 369 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 OR2T1O43869 369 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 NPIPA8P0DM63 369 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 LAMP1P11279 417 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 CPT2P23786 658 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 OR9K2Q8NGE7 335 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 CRB3Q9BUF7 120 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 DPH1Q9BZG8 443 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 SAP130Q9H0E3 1048 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 C1GALT1Q9NS00 363 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 IGSF5Q9NSI5 407 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 PTGDR2Q9Y5Y4 395 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 STYXL1Q9Y6J8 313 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 LRIT2A6NDA9 550 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 BTBD17A6NE02 478 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 IL4RP24394 825 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 TAGLN2P37802 199 aaKnown RBP12.06□□□□□ -0.48
SMC4-202ENST00000357388 NSDHLQ15738 373 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 TMEM31Q5JXX7 168 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 MRPL10Q7Z7H8 261 aaKnown RBP12.06□□□□□ -0.48
SMC4-202ENST00000357388 PXYLP1Q8TE99 480 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 CASD1Q96PB1 797 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 SEC22CQ9BRL7 303 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 ZNF281Q9Y2X9 895 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 PMS2P2O95744 297 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 ARAFP10398 606 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 GPX3P22352 226 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 PRDX3P30048 256 aaKnown RBP12.06□□□□□ -0.48
SMC4-202ENST00000357388 HHEXQ03014 270 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 ACSM1Q08AH1 577 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 CATR1Q13166 79 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 PLK5Q496M5 336 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 C3orf38Q5JPI3 329 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 NAGSQ8N159 534 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 ANKRD9Q96BM1 317 aaPredicted RBP12.06□□□□□ -0.48
SMC4-202ENST00000357388 ZMYND19Q96E35 227 aaPredicted RBP12.06□□□□□ -0.48
SMC4-202ENST00000357388 SLC25A18Q9H1K4 315 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 ANKRD19PQ9H560 264 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 ACAD8Q9UKU7 415 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 A0A0B4J2A0 478 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 LOC102725191A0A1B0GVB3 256 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 ANKRD34BA5PLL1 514 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 TMEM200CA6NKL6 621 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 GLSO94925 669 aaPredicted RBP12.06□□□□□ -0.48
SMC4-202ENST00000357388 DDCP20711 480 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 RPS26P62854 115 aaKnown RBP12.06□□□□□ -0.48
SMC4-202ENST00000357388 NADSYN1Q6IA69 706 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 B3GLCTQ6Y288 498 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 USP53Q70EK8 1073 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 FAM213BQ8TBF2 198 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 DUSP19Q8WTR2 217 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 PHYHIPQ92561 330 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 LMF2Q9BU23 707 aaKnown RBP12.06□□□□□ -0.48
SMC4-202ENST00000357388 SLC12A9Q9BXP2 914 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 ACKR4Q9NPB9 350 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 CREBZFQ9NS37 354 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 SLC39A9Q9NUM3 307 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 SHPKQ9UHJ6 478 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 SPO11Q9Y5K1 396 aa12.06□□□□□ -0.48
SMC4-202ENST00000357388 A8MVM7 634 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 ZNF623O75123 536 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 SPI1P17947 270 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 RAB1AP62820 205 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 CBLL1Q75N03 491 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 KCNRGQ8N5I3 272 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 ANKRD53Q8N9V6 530 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 OR9A2Q8NGT5 310 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 RHBDD1Q8TEB9 315 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 FUBP1Q96AE4 644 aaKnown RBP12.05□□□□□ -0.48
SMC4-202ENST00000357388 C4orf36Q96KX1 117 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 EHFQ9NZC4 300 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 PIRO00625 290 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 TGM4P49221 684 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 PGGHGQ32M88 737 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 ZMAT1Q5H9K5 638 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 FBXO46Q6PJ61 603 aaPredicted RBP12.05□□□□□ -0.48
SMC4-202ENST00000357388 LARP4Q71RC2 724 aaKnown RBP eCLIP12.05□□□□□ -0.481e-17■■■■□ 24.2
SMC4-202ENST00000357388 CD163Q86VB7 1156 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 OR56B1Q8NGI3 324 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 OR13F1Q8NGS4 319 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 FAM3CQ92520 227 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 BADQ92934 168 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 SENP5Q96HI0 755 aaPredicted RBP12.05□□□□□ -0.48
SMC4-202ENST00000357388 PCDHB10Q9UN67 800 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 WASH4PA8MWX3 477 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 OLFM2O95897 454 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 TK1P04183 234 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 ADRB1P08588 477 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 HOXB5P09067 269 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 CSF2RAP15509 400 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 ZNF28P17035 718 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 DRD1P21728 446 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 ERVPABLB-1P60509 514 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 TGFBR3Q03167 851 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 HTR4Q13639 388 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 NDUFAF7Q7L592 441 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 SPRED1Q7Z699 444 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 ISCA2Q86U28 154 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 PDZD3Q86UT5 571 aa12.05□□□□□ -0.48
SMC4-202ENST00000357388 KLHDC8BQ8IXV7 354 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms