RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 WBP2NLQ6ICG8 309 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 Q6ZPB1 254 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 CCDC121Q6ZUS5 278 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 NCCRP1Q6ZVX7 275 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 CBLL1Q75N03 491 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 GRINAQ7Z429 371 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 YTHDF3Q7Z739 585 aaKnown RBP16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 TSPYL5Q86VY4 417 aaPredicted RBP16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 RPRMLQ8N4K4 120 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 HSH2DQ96JZ2 352 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 GORASP2Q9H8Y8 452 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 MAGEL2Q9UJ55 1249 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 OSGIN1Q9UJX0 560 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 ESPL1Q14674 2120 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 J3QKU1 62 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 GSC2O15499 205 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 ATP5HO75947 161 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 ATP6V1B2P21281 511 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 ADH6P28332 368 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 NCALDP61601 193 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 SPATS1Q496A3 300 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 FKBP9P1Q75LS8 142 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 GGNQ86UU5 652 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 ADGRG3Q86Y34 549 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 SLC35B4Q969S0 331 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 MCHR1Q99705 422 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 PRDM14Q9GZV8 571 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 ADAM19Q9H013 955 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 DCAF13Q9NV06 445 aaKnown RBP16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 SLC9A8Q9Y2E8 581 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 AP4B1Q9Y6B7 739 aa16.11■□□□□ 0.17
PDLIM7-202ENST00000355841 TMED7-TICAM2A0A0A6YYA0 188 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 A0A1B0GWA3 101 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 CPSF4LA6NMK7 179 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 H0Y3Z8 333 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 EIF1AYO14602 144 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 STSP08842 583 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 CPN1P15169 458 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 RASSF2P50749 326 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 POLR2HP52434 150 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 RAC1P63000 192 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 FOXD4Q12950 439 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 BNIP2Q12982 314 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 TRIM25Q14258 630 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 OR1Q1Q15612 314 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 TMEM176BQ3YBM2 270 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 DEF8Q6ZN54 512 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 FJX1Q86VR8 437 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 RANBP3LQ86VV4 465 aaPredicted RBP16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 ULK2Q8IYT8 1036 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 LZICQ8WZA0 190 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 C3orf49Q96BT1 292 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 TUBA1CQ9BQE3 449 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 ZNF559Q9BR84 538 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 OR11A1Q9GZK7 315 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 TESQ9UGI8 421 aaKnown RBP16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 TMED7Q9Y3B3 224 aa16.1■□□□□ 0.17
PDLIM7-202ENST00000355841 LINC01387J3KSC0 135 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 TNFSF11O14788 317 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 SEMA7AO75326 666 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 PRKD3O94806 890 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 PTNP21246 168 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 ELK4P28324 431 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 APOBEC1P41238 236 aaKnown RBP16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 CA7P43166 264 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 DLX5P56178 289 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 SELENBP1Q13228 472 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 RNF217Q8TC41 542 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 MCUR1Q96AQ8 359 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 ZNF845Q96IR2 970 aaPredicted RBP16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 NSMCE2Q96MF7 247 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 RPS6KB2Q9UBS0 482 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 CHRNA9Q9UGM1 479 aa16.09■□□□□ 0.17
PDLIM7-202ENST00000355841 A0A0J9YW62 118 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 A0A1W2PNR3 127 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 TMEM72A0PK05 275 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 LRRTM2O43300 516 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 ACVR2AP27037 513 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 YAP1P46937 504 aaKnown RBP16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 CASP6P55212 293 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 BCL2A1Q16548 175 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 CTU2Q2VPK5 515 aaKnown RBP16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 ENTPD8Q5MY95 495 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 RTL6Q6ICC9 239 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 C3orf33Q6P1S2 294 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 PGM2L1Q6PCE3 622 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 RPTNQ6XPR3 784 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 PM20D2Q8IYS1 436 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 MEIOBQ8N635 442 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 LSMEM1Q8N8F7 131 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 TRIM2Q9C040 744 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 LRMDAQ9H2I8 198 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 TMEM27Q9HBJ8 222 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 ACTR3BQ9P1U1 418 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 RPS6KA6Q9UK32 745 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 FAM215AQ9Y5M1 114 aa16.08■□□□□ 0.17
PDLIM7-202ENST00000355841 MYO18BQ8IUG5 2567 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 ZC3H12DA2A288 527 aaKnown RBP16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 FIGNL2A6NMB9 653 aa16.08■□□□□ 0.16
PDLIM7-202ENST00000355841 CCL21O00585 134 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms