RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 BRF2Q9HAW0 419 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 C11orf16Q9NQ32 467 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 OR6C68A6NDL8 312 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 NPIPB15A6NHN6 443 aaPredicted RBP10.07□□□□□ -0.8
SND1-201ENST00000354725 MAGEB17A8MXT2 336 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 OIP5O43482 229 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 LGI1O95970 557 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 STARD6P59095 220 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 RAC3P60763 192 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 SZRD1Q7Z422 152 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 CBLN2Q8IUK8 224 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 ZNF383Q8NA42 475 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 POMGNT2Q8NAT1 580 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 DENND6BQ8NEG7 585 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 SELENOMQ8WWX9 145 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 LIPHQ8WWY8 451 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 ERMAPQ96PL5 475 aaPredicted RBP10.07□□□□□ -0.8
SND1-201ENST00000354725 TSSK3Q96PN8 268 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 ABHD1Q96SE0 405 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 GGACTQ9BVM4 153 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 ASCL3Q9NQ33 180 aa10.07□□□□□ -0.8
SND1-201ENST00000354725 A0A1W2PRU2 124 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 QSOX1O00391 747 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 RGS11O94810 467 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 HSD3B1P14060 373 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 DNASE1P24855 282 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 ITGA3P26006 1051 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 MSX1P28360 303 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 C21orf33P30042 268 aaPredicted RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 PTSQ03393 145 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 OPCMLQ14982 345 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 CPSF6Q16630 551 aaKnown RBP eCLIP10.06□□□□□ -0.8
SND1-201ENST00000354725 ZNF311Q5JNZ3 666 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 FAM78AQ5JUQ0 283 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 ZNF770Q6IQ21 691 aaPredicted RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 HEPHL1Q6MZM0 1159 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 ZC3H14Q6PJT7 736 aaKnown RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 PGAP1Q75T13 922 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 NAA40Q86UY6 237 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 LDLRAD3Q86YD5 345 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 EGFL8Q99944 293 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 DOHHQ9BU89 302 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 DHCR7Q9UBM7 475 aaKnown RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 CCL26Q9Y258 94 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 LSM2Q9Y333 95 aaKnown RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 CFAP20Q9Y6A4 193 aaKnown RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 NUP214P35658 2090 aaPredicted RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 ARHGEF33A8MVX0 844 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 EFSO43281 561 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 RAD1O60671 282 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 DIRAS1O95057 198 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 RHOAP61586 193 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 SELENOWP63302 87 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 IL24Q13007 206 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 GAB1Q13480 694 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 RGNQ15493 299 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 ZNF77Q15935 545 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 PLEKHS1Q5SXH7 462 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 AHSA2Q719I0 299 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 NDUFAF7Q7L592 441 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 DCXRQ7Z4W1 244 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 VRK3Q8IV63 474 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 ZNF687Q8N1G0 1237 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 RXFP4Q8TDU9 374 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 UCN3Q969E3 161 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 OTULINQ96BN8 352 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 ZBED6CLQ96FA7 236 aaPredicted RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 LRIG1Q96JA1 1093 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 LRFN5Q96NI6 719 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 CCNL2Q96S94 520 aaPredicted RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 DPH2Q9BQC3 489 aaPredicted RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 PIMREGQ9BSJ6 248 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 KLHL31Q9H511 634 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 REEP4Q9H6H4 257 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 METTL7AQ9H8H3 244 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 PRAMEF33A0A0G2JMD5 474 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 C5orf51A6NDU8 294 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 PRAMEF10O60809 474 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 ICOSLGO75144 302 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 ZNF682O95780 498 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 HIST1H2AGP0C0S8 130 aaPredicted RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 PIPP12273 146 aaPredicted RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 HIST1H2ADP20671 130 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 GRK6P43250 576 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 GCGRP47871 477 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 DDX39BQ13838 428 aaKnown RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 ZNHIT3Q15649 155 aaPredicted RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 PLEKHN1Q494U1 663 aaPredicted RBP10.06□□□□□ -0.8
SND1-201ENST00000354725 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 HIST2H2AA3Q6FI13 130 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 CMTM8Q8IZV2 173 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 FGF14Q92915 247 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 ELSPBP1Q96BH3 223 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 CXorf40BQ96DE9 158 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 HIST1H2AHQ96KK5 128 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 HIST1H2AJQ99878 128 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 MFRPQ9BY79 579 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 REEP1Q9H902 201 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 CLCA2Q9UQC9 943 aa10.06□□□□□ -0.8
SND1-201ENST00000354725 NUBP2Q9Y5Y2 271 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms