RNA–Protein interactions for RNA: ENST00000354530.2

CTSL3P-201, Transcript of cathepsin L family member 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CTSL3P, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3P-201ENST00000354530 COMTD1Q86VU5 262 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 CXorf67Q86X51 503 aaPredicted RBP6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 MISPQ8IVT2 679 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 DPP10Q8N608 796 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 ANKFN1Q8N957 763 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 OR6K3Q8NGY3 331 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 TMEM171Q8WVE6 324 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 PIK3IP1Q96FE7 263 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 TRNT1Q96Q11 434 aaKnown RBP6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 USB1Q9BQ65 265 aaKnown RBP6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 SRXN1Q9BYN0 137 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 GSX2Q9BZM3 304 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 HOXD1Q9GZZ0 328 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 QRSL1Q9H0R6 528 aaKnown RBP6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 GSX1Q9H4S2 264 aaPredicted RBP6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 IKZF5Q9H5V7 419 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 TMEM185BQ9H7F4 350 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 UBTD1Q9HAC8 227 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 NGBQ9NPG2 151 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 SAR1AQ9NR31 198 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 POLE3Q9NRF9 147 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 VAPAQ9P0L0 249 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 MKLN1Q9UL63 735 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 MCTS1Q9ULC4 181 aaKnown RBP6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 ICAM5Q9UMF0 924 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 PROCRQ9UNN8 238 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 VDAC3Q9Y277 283 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 CARD8Q9Y2G2 431 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 DTNAQ9Y4J8 743 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 GMEB1Q9Y692 573 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 FN1P02751 2386 aaKnown RBP6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 ABCA1O95477 2261 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 USF3Q68DE3 2245 aa6.6□□□□□ -1.35
CTSL3P-201ENST00000354530 DSPPQ9NZW4 1301 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 A0A087WZY1 265 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 A0A0J9YW62 118 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 SERINC4A6NH21 518 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 H3BML4 177 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 CLIC1O00299 241 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 FBP2O00757 339 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 SEC14L5O43304 696 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 FESP07332 822 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 NUDT7P0C024 238 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 TFPTP0C1Z6 253 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 PABPC4LP0CB38 370 aaKnown RBP6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 BMP2P12643 396 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 HPGDP15428 266 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 RPS4Y1P22090 263 aaKnown RBP6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 ME2P23368 584 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 LSP1P33241 339 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 CRATP43155 626 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 KIR2DL2P43627 348 aaPredicted RBP6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 ANXA11P50995 505 aaKnown RBP6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 SEC24CP53992 1094 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 CTBP2P56545 445 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 DSTNP60981 165 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 CHRNEQ04844 493 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 SKP2Q13309 424 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 RGNQ15493 299 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 SGCBQ16585 318 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 ATAD3BQ5T9A4 648 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 GTF2IRD2BQ6EKJ0 949 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 ZNF474Q6S9Z5 364 aaPredicted RBP6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 LRRC74BQ6ZQY2 392 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 BEND4Q6ZU67 534 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 PLEKHM3Q6ZWE6 761 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 BTLAQ7Z6A9 289 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 YTHDF3Q7Z739 585 aaKnown RBP6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 GTF2IRD2Q86UP8 949 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 ZNF619Q8N2I2 560 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 METTL25Q8N6Q8 603 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 ZNF614Q8N883 585 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 ZNF527Q8NB42 609 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 FAM71CQ8NEG0 241 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 B4GALNT2Q8NHY0 566 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 FNDC9Q8TBE3 224 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 PHOSPHO1Q8TCT1 267 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 TSPEARQ8WU66 669 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 OIT3Q8WWZ8 545 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 STARD4Q96DR4 205 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 GMPPAQ96IJ6 420 aaPredicted RBP6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 Q96MF0 132 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 RNF145Q96MT1 663 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 PINK1Q9BXM7 581 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 PRRG4Q9BZD6 226 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 OPN3Q9H1Y3 402 aaPredicted RBP6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 SLC38A1Q9H2H9 487 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 COQ10BQ9H8M1 238 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 RNF122Q9H9V4 155 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 MED17Q9NVC6 651 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 KLHL28Q9NXS3 571 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 LEF1Q9UJU2 399 aaPredicted RBP6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 ING1Q9UK53 422 aaPredicted RBP6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 CLEC4AQ9UMR7 237 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 LIPT1Q9Y234 373 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 NDUFAF1Q9Y375 327 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 WDR45Q9Y484 360 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 CHST2Q9Y4C5 530 aa6.59□□□□□ -1.35
CTSL3P-201ENST00000354530 C7orf72A4D263 438 aa6.58□□□□□ -1.36
CTSL3P-201ENST00000354530 AGAP5A6NIR3 686 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms