RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CHRM4P08173 479 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 CLUP10909 449 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 EDNRAP25101 427 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 FAUP35544 74 aaKnown RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 PSMB10P40306 273 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 ANXA11P50995 505 aaKnown RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 PDZK1IP1Q13113 114 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 CCL15Q16663 113 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 PCGF3Q3KNV8 242 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 C9orf64Q5T6V5 341 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 SEZ6L2Q6UXD5 910 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 RNF180Q86T96 592 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 CMIPQ8IY22 773 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 BEST3Q8N1M1 668 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 DCAF4L2Q8NA75 395 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 ZSCAN1Q8NBB4 408 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 OR56A3Q8NH54 315 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 SYNPRQ8TBG9 265 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 DUSP19Q8WTR2 217 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 GAL3ST1Q99999 423 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 HCAR1Q9BXC0 346 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 PRMT8Q9NR22 394 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 POT1Q9NUX5 634 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 GNG8Q9UK08 70 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 KLF2Q9Y5W3 355 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 TDRD15B5MCY1 1934 aaKnown RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 FEZF1A0PJY2 475 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 MYADML2A6NDP7 307 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 OR2W5A6NFC9 320 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 ACOD1A6NK06 481 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 OR2AT4A6NND4 320 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 GABARAPH6UMI1 98 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 SOCS5O75159 536 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 PRKRAO75569 313 aaKnown RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 CNR1P21554 472 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 GALP22466 123 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 NAA10P41227 235 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 KHKP50053 298 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 TAS2R43P59537 309 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 MAT1AQ00266 395 aaKnown RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 TGM3Q08188 693 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 TSC22D1Q15714 1073 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 CDKN3Q16667 212 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 H3F3CQ6NXT2 135 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 NXPE4Q6UWF7 544 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 RSPO2Q6UXX9 243 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 DNAAF1Q8NEP3 725 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 OR2AK2Q8NG84 335 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 OR14A16Q8NHC5 309 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 SLC25A28Q96A46 364 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 PNPLA2Q96AD5 504 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 ZG16BQ96DA0 208 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 C16orf58Q96GQ5 468 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF75AQ96N20 296 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 PDCD1LG2Q9BQ51 273 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 OR52D1Q9H346 318 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 ADARB2Q9NS39 739 aaKnown RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 GPR55Q9Y2T6 319 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 DOCK6Q96HP0 2047 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 OR2M5A3KFT3 312 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 LRIT2A6NDA9 550 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 HMSDA8MTL9 139 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 F5H0A9 414 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 FOXE1O00358 373 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 LCMT2O60294 686 aaKnown RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 AKR7A3O95154 331 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 HMGN2P05204 90 aaKnown RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 CPN1P15169 458 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 RFC3P40938 356 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 MAGEB1P43366 347 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 ZNF234Q14588 700 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 FAM26DQ5JW98 314 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 NIPAL3Q6P499 406 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 RBMS3Q6XE24 437 aaKnown RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 CCDC116Q8IYX3 515 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 OR51A7Q8NH64 312 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 PAQR8Q8TEZ7 354 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 LINC01599Q8WXQ3 324 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 FGF11Q92914 225 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 UBE2E3Q969T4 207 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 TMPRSS13Q9BYE2 586 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 KLHL31Q9H511 634 aa7.08□□□□□ -1.28
BRCA1-201ENST00000352993 EXOSC3Q9NQT5 275 aaKnown RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 MYEF2Q9P2K5 600 aaKnown RBP7.08□□□□□ -1.28
BRCA1-201ENST00000352993 PLPP1O14494 284 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 YKT6O15498 198 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 NDUFS6O75380 124 aaKnown RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 RBBP9O75884 186 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 SLCO2B1O94956 709 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 UBBP0CG47 229 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 UBCP0CG48 685 aaKnown RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 VSIG10L2P0DP72 767 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 GAAP10253 952 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 NTSP30990 170 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 TRHRP34981 398 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 CTSOP43234 321 aaPredicted RBP7.07□□□□□ -1.28
BRCA1-201ENST00000352993 OMPP47874 163 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 NRG3P56975 720 aa7.07□□□□□ -1.28
BRCA1-201ENST00000352993 RAB5BP61020 215 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms