RNA–Protein interactions for RNA: ENST00000352260.11

SPNS1-204, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-204ENST00000352260 EXOSC1Q9Y3B2 195 aaKnown RBP17.23■□□□□ 0.35
SPNS1-204ENST00000352260 CCDC88CQ9P219 2028 aa17.23■□□□□ 0.35
SPNS1-204ENST00000352260 BCAT2O15382 392 aaPredicted RBP17.23■□□□□ 0.35
SPNS1-204ENST00000352260 ATP1B1P05026 303 aa17.23■□□□□ 0.35
SPNS1-204ENST00000352260 ATF4P18848 351 aaPredicted RBP17.23■□□□□ 0.35
SPNS1-204ENST00000352260 NT5EP21589 574 aa17.23■□□□□ 0.35
SPNS1-204ENST00000352260 GABRA4P48169 554 aa17.23■□□□□ 0.35
SPNS1-204ENST00000352260 PPM1FP49593 454 aaPredicted RBP17.23■□□□□ 0.35
SPNS1-204ENST00000352260 EPHA4P54764 986 aa17.23■□□□□ 0.35
SPNS1-204ENST00000352260 SIGLEC14Q08ET2 396 aa17.23■□□□□ 0.35
SPNS1-204ENST00000352260 RAB40BQ12829 278 aa17.23■□□□□ 0.35
SPNS1-204ENST00000352260 HEPHL1Q6MZM0 1159 aa17.23■□□□□ 0.35
SPNS1-204ENST00000352260 CD300LDQ6UXZ3 194 aa17.23■□□□□ 0.35
SPNS1-204ENST00000352260 GLCCI1Q86VQ1 547 aa17.23■□□□□ 0.35
SPNS1-204ENST00000352260 SLC16A11Q8NCK7 471 aa17.23■□□□□ 0.35
SPNS1-204ENST00000352260 ANKRD9Q96BM1 317 aaPredicted RBP17.23■□□□□ 0.35
SPNS1-204ENST00000352260 TGM7Q96PF1 710 aa17.23■□□□□ 0.35
SPNS1-204ENST00000352260 GFM1Q96RP9 751 aaKnown RBP17.23■□□□□ 0.35
SPNS1-204ENST00000352260 C19orf53Q9UNZ5 99 aaPredicted RBP17.23■□□□□ 0.35
SPNS1-204ENST00000352260 A0A0A6YYJ9 748 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 DUXAA6NLW8 204 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 CASKO14936 926 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 CHST10O43529 356 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 HPGDSO60760 199 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 ZIC2O95409 532 aaPredicted RBP17.22■□□□□ 0.35
SPNS1-204ENST00000352260 H1F0P07305 194 aaKnown RBP17.22■□□□□ 0.35
SPNS1-204ENST00000352260 ACP2P11117 423 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 ELAVL4P26378 380 aaKnown RBP17.22■□□□□ 0.35
SPNS1-204ENST00000352260 ETV1P50549 477 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 GBX2P52951 348 aaPredicted RBP17.22■□□□□ 0.35
SPNS1-204ENST00000352260 RAG2P55895 527 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 COX10Q12887 443 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 FCN2Q15485 313 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 SLC9A6Q92581 669 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 CDS1Q92903 461 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 PHF21AQ96BD5 680 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 OTULINQ96BN8 352 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 TM9SF2Q99805 663 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 GHITMQ9H3K2 345 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 KIF25Q9UIL4 384 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 A4GNTQ9UNA3 340 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 SLC9A8Q9Y2E8 581 aa17.22■□□□□ 0.35
SPNS1-204ENST00000352260 A0A087WV62 115 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 A0A0A6YYC8 382 aaPredicted RBP17.21■□□□□ 0.35
SPNS1-204ENST00000352260 FAM86C2PA6NEL3 165 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 I3L1I5 382 aaPredicted RBP17.21■□□□□ 0.35
SPNS1-204ENST00000352260 CASC3O15234 703 aaKnown RBP17.21■□□□□ 0.35
SPNS1-204ENST00000352260 AGR2O95994 175 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 PDGFBP01127 241 aaPredicted RBP17.21■□□□□ 0.35
SPNS1-204ENST00000352260 HOXD4P09016 255 aaPredicted RBP17.21■□□□□ 0.35
SPNS1-204ENST00000352260 PEPDP12955 493 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 ZNF250P15622 560 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 C4BPBP20851 252 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 AFF3P51826 1226 aaKnown RBP17.21■□□□□ 0.35
SPNS1-204ENST00000352260 PDX1P52945 283 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 RPS25P62851 125 aaKnown RBP17.21■□□□□ 0.35
SPNS1-204ENST00000352260 P2RY14Q15391 338 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 SEC23BQ15437 767 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 ZNF57Q68EA5 555 aaPredicted RBP17.21■□□□□ 0.35
SPNS1-204ENST00000352260 BMP8AQ7Z5Y6 402 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 LINC00471Q8N535 108 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 ZNF285Q96NJ3 590 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 ZNF224Q9NZL3 707 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 COPZ2Q9P299 210 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 FBXO9Q9UK97 447 aaPredicted RBP17.21■□□□□ 0.35
SPNS1-204ENST00000352260 SPAG17Q6Q759 2223 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 TLCD2A6NGC4 264 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 RHPN2P1A8MT19 583 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 FOXS1O43638 330 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 SCO1O75880 301 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 ZP3P21754 424 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 ETV5P41161 510 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 MGAT2Q10469 447 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 GPR176Q14439 515 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 ZNF267Q14586 743 aaPredicted RBP17.21■□□□□ 0.35
SPNS1-204ENST00000352260 DUSP5Q16690 384 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 PRICKLE4Q2TBC4 344 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 ZNF311Q5JNZ3 666 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 DCST1Q5T197 706 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 NKAIN2Q5VXU1 208 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 VRK2Q86Y07 508 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 OR6T1Q8NGN1 323 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 ZG16BQ96DA0 208 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 FUZQ9BT04 418 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 ZNF275Q9NSD4 429 aaPredicted RBP17.21■□□□□ 0.35
SPNS1-204ENST00000352260 MED9Q9NWA0 146 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 EMC3Q9P0I2 261 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 PLCL2Q9UPR0 1127 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 NUBP2Q9Y5Y2 271 aa17.21■□□□□ 0.35
SPNS1-204ENST00000352260 IGHV5-51A0A0C4DH38 117 aa17.2■□□□□ 0.34
SPNS1-204ENST00000352260 A0A1B0GVT2 93 aa17.2■□□□□ 0.34
SPNS1-204ENST00000352260 HLA-DPB1P04440 258 aa17.2■□□□□ 0.34
SPNS1-204ENST00000352260 ACSM1Q08AH1 577 aa17.2■□□□□ 0.34
SPNS1-204ENST00000352260 PIN1Q13526 163 aaPredicted RBP17.2■□□□□ 0.34
SPNS1-204ENST00000352260 EXOSC6Q5RKV6 272 aaKnown RBP17.2■□□□□ 0.34
SPNS1-204ENST00000352260 FRRS1Q6ZNA5 592 aa17.2■□□□□ 0.34
SPNS1-204ENST00000352260 TCEANCQ8N8B7 351 aa17.2■□□□□ 0.34
SPNS1-204ENST00000352260 OR10Z1Q8NGY1 313 aa17.2■□□□□ 0.34
SPNS1-204ENST00000352260 RBPMSQ93062 196 aaKnown RBP17.2■□□□□ 0.34
SPNS1-204ENST00000352260 RBCK1Q9BYM8 510 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms