RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 DCDC2BA2VCK2 349 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 PIP5K1CO60331 668 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 TNFSF15O95150 251 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 CD63P08962 238 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 ZNF16P17020 682 aaPredicted RBP12.71□□□□□ -0.38
SMC6-201ENST00000351948 SEC23BQ15437 767 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 HES5Q5TA89 166 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 C6orf15Q6UXA7 325 aaPredicted RBP12.71□□□□□ -0.38
SMC6-201ENST00000351948 SLC35D2Q76EJ3 337 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 ABHD11Q8NFV4 315 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 SPRYD4Q8WW59 207 aaPredicted RBP12.71□□□□□ -0.38
SMC6-201ENST00000351948 ZNF597Q96LX8 424 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 C1QTNF3Q9BXJ4 246 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 ZNF225Q9UK10 706 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 CROCCQ5TZA2 2017 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 C5orf51A6NDU8 294 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 ALPLP05186 524 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 ABOP16442 354 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 CD97P48960 835 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 BMXP51813 675 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 NLRP8Q86W28 1048 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 SLC25A18Q9H1K4 315 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 FN3KQ9H479 309 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 NT5DC2Q9H857 520 aa12.71□□□□□ -0.38
SMC6-201ENST00000351948 DNAJB5O75953 348 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 RFC3P40938 356 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 KIR2DL1P43626 348 aaPredicted RBP12.7□□□□□ -0.38
SMC6-201ENST00000351948 TSFMP43897 325 aaKnown RBP12.7□□□□□ -0.38
SMC6-201ENST00000351948 DAP3P51398 398 aaKnown RBP12.7□□□□□ -0.38
SMC6-201ENST00000351948 ELAVL1Q15717 326 aaKnown RBP12.7□□□□□ -0.38
SMC6-201ENST00000351948 OR7E24Q6IFN5 339 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 ZNF836Q6ZNA1 936 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 SLC22A16Q86VW1 577 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 CA13Q8N1Q1 262 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 CST11Q9H112 138 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 KCND3Q9UK17 655 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 POMT2Q9UKY4 750 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 SLC7A11Q9UPY5 501 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 HSPE1-MOB4S4R3N1 261 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 UNC13CQ8NB66 2214 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 C4orf47A7E2U8 309 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 HMGN4O00479 90 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 ANKRD28O15084 1053 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 NSA2O95478 260 aaKnown RBP12.7□□□□□ -0.38
SMC6-201ENST00000351948 ECH1Q13011 328 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 OR2G6Q5TZ20 316 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 OR5AK2Q8NH90 309 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 FKBP10Q96AY3 582 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 GABRG3Q99928 467 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 TSPAN10Q9H1Z9 355 aaPredicted RBP12.7□□□□□ -0.38
SMC6-201ENST00000351948 CHST8Q9H2A9 424 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 NDUFAF4Q9P032 175 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 CRABP1P29762 137 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 STT3AP46977 705 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 NOVA1P51513 510 aaKnown RBP12.7□□□□□ -0.38
SMC6-201ENST00000351948 TPTEP56180 551 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 CSNK2A1P68400 391 aaPredicted RBP12.7□□□□□ -0.38
SMC6-201ENST00000351948 SIRPAP78324 504 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 ATAD3CQ5T2N8 411 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 SLC22A10Q63ZE4 541 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 PRSS41Q7RTY9 318 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 LIX1LQ8IVB5 337 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 CNRIP1Q96F85 164 aaPredicted RBP12.7□□□□□ -0.38
SMC6-201ENST00000351948 KLHL15Q96M94 604 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 FUZQ9BT04 418 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 ATP13A2Q9NQ11 1180 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 TMEM9Q9P0T7 183 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 IGLV3-16A0A075B6K0 115 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 TRAV6A0A075B6T7 132 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 TSPAN11A1L157 253 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 EEF1E1O43324 174 aaKnown RBP12.7□□□□□ -0.38
SMC6-201ENST00000351948 SYT7O43581 403 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 CTSVO60911 334 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 CAPNS1P04632 268 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 STARP49675 285 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 GRAMD2AQ8IUY3 354 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 AMER3Q8N944 861 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 UBE2FQ969M7 185 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 TAS2R16Q9NYV7 291 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 CTSFQ9UBX1 484 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 ZNF221Q9UK13 617 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 SLC22A7Q9Y694 548 aa12.7□□□□□ -0.38
SMC6-201ENST00000351948 FOCADQ5VW36 1801 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 TMED7-TICAM2A0A0A6YYA0 188 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 PLOD2O00469 737 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 GAPDHSO14556 408 aaPredicted RBP12.69□□□□□ -0.38
SMC6-201ENST00000351948 DDAH2O95865 285 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 WNT4P56705 351 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 MALLQ13021 153 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 PLAG1Q6DJT9 500 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 GDF7Q7Z4P5 450 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 INTS14Q96SY0 518 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 OR51E2Q9H255 320 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 CD300AQ9UGN4 299 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 TMED7Q9Y3B3 224 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 MAGEA8P43361 318 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 FXYD6P3P58550 94 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 LTBP1Q14766 1721 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 B3GNT8Q7Z7M8 397 aa12.69□□□□□ -0.38
SMC6-201ENST00000351948 NKAIN4Q8IVV8 208 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms