RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ZNF439Q8NDP4 499 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 SLC45A1Q9Y2W3 748 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 DHRS4L1P0CG22 281 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 SPI1P17947 270 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 NPBWR1P48145 328 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 TGFBR3Q03167 851 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 FAM74A1Q5RGS3 127 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 FAM160A2Q8N612 972 aaPredicted RBP18.21■□□□□ 0.51
HDAC4-201ENST00000345617 KLHDC1Q8N7A1 406 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 C4orf36Q96KX1 117 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 LIN7BQ9HAP6 207 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 EHFQ9NZC4 300 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 KLF15Q9UIH9 416 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 FOXD2O60548 495 aaPredicted RBP18.21■□□□□ 0.51
HDAC4-201ENST00000345617 UBE2G2P60604 165 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 NHLRC2Q8NBF2 726 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 YIPF1Q9Y548 306 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 TMEM127O75204 238 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 DEFB134Q4QY38 66 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 C5orf46Q6UWT4 87 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 PDZD3Q86UT5 571 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 ZNF160Q9HCG1 818 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 HCCSP53701 268 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 CTXN1P60606 82 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 FAM111BQ6SJ93 734 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 MEX3BQ6ZN04 569 aaKnown RBP18.21■□□□□ 0.51
HDAC4-201ENST00000345617 SCARB1Q8WTV0 552 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 AMDHD1Q96NU7 426 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 NKX6-2Q9C056 277 aaPredicted RBP18.21■□□□□ 0.51
HDAC4-201ENST00000345617 ALPLP05186 524 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 CDKN2DP55273 166 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 BTG1P62324 171 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 PRRT3Q5FWE3 981 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 KDM8Q8N371 416 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 MARC2Q969Z3 335 aa18.21■□□□□ 0.51
HDAC4-201ENST00000345617 BSCL2Q96G97 398 aaPredicted RBP18.21■□□□□ 0.51
HDAC4-201ENST00000345617 PUS1Q9Y606 427 aaKnown RBP eCLIP18.21■□□□□ 0.51
HDAC4-201ENST00000345617 PPP1R3DO95685 299 aa18.21■□□□□ 0.5
HDAC4-201ENST00000345617 ETV4P43268 484 aa18.21■□□□□ 0.5
HDAC4-201ENST00000345617 FLT3LGP49771 235 aa18.21■□□□□ 0.5
HDAC4-201ENST00000345617 CLEC4DQ8WXI8 215 aa18.21■□□□□ 0.5
HDAC4-201ENST00000345617 GAREM1Q9H706 876 aa18.21■□□□□ 0.5
HDAC4-201ENST00000345617 PRDM9Q9NQV7 894 aa18.21■□□□□ 0.5
HDAC4-201ENST00000345617 FABP1P07148 127 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 HNF1BP35680 557 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 DUSP6Q16828 381 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 SYT13Q7L8C5 426 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 FAM96BQ9Y3D0 163 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 DDOSTP39656 456 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 C11orf91Q3C1V1 193 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 SDSLQ96GA7 329 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 SAMD8Q96LT4 415 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 IGKV6D-41A0A0C4DH26 115 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 TAAR5O14804 337 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 MPIG6BO95866 241 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 TBX18O95935 607 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 SSTR2P30874 369 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 HYAL2Q12891 473 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 PLK5Q496M5 336 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 FUBP1Q96AE4 644 aaKnown RBP18.2■□□□□ 0.5
HDAC4-201ENST00000345617 XYLT2Q9H1B5 865 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 PCDHB10Q9UN67 800 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 A0A1W2PRU2 124 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 F2RL1P55085 397 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 C2orf27AQ580R0 203 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 RNF113BQ8IZP6 322 aaKnown RBP18.2■□□□□ 0.5
HDAC4-201ENST00000345617 C20orf85Q9H1P6 137 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 AJAP1Q9UKB5 411 aaPredicted RBP18.2■□□□□ 0.5
HDAC4-201ENST00000345617 DOC2AQ14183 400 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 G3V2L1 256 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 SFRP5Q5T4F7 317 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 FAM58AQ8N1B3 248 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 SEMA6CQ9H3T2 930 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 EXOSC3Q9NQT5 275 aaKnown RBP18.2■□□□□ 0.5
HDAC4-201ENST00000345617 LYRM2Q9NU23 88 aaPredicted RBP18.2■□□□□ 0.5
HDAC4-201ENST00000345617 RIMS3Q9UJD0 308 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 RPS17P08708 135 aaKnown RBP18.2■□□□□ 0.5
HDAC4-201ENST00000345617 PRDX3P30048 256 aaKnown RBP18.2■□□□□ 0.5
HDAC4-201ENST00000345617 OR9Q2Q8NGE9 314 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 OR52B6Q8NGF0 335 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 SLC7A7Q9UM01 511 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 PLAGL1Q9UM63 463 aa18.2■□□□□ 0.5
HDAC4-201ENST00000345617 ANKRD36A6QL64 1941 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 PPP5D1E7EU14 171 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 FOXE1O00358 373 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-201ENST00000345617 DDNO94850 711 aaPredicted RBP18.19■□□□□ 0.5
HDAC4-201ENST00000345617 APLNRP35414 380 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 RAB1AP62820 205 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 MEPCEQ7L2J0 689 aaKnown RBP18.19■□□□□ 0.5
HDAC4-201ENST00000345617 ADGRG5Q8IZF4 528 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 IL37Q9NZH6 218 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 RPS27LQ71UM5 84 aaKnown RBP18.19■□□□□ 0.5
HDAC4-201ENST00000345617 M1APQ8TC57 530 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 CORO2AQ92828 525 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 RSPRY1Q96DX4 576 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 MRPL21Q7Z2W9 205 aaKnown RBP18.19■□□□□ 0.5
HDAC4-201ENST00000345617 GLIS1Q8NBF1 620 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 SEMA4CQ9C0C4 833 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 NRIP3Q9NQ35 241 aa18.19■□□□□ 0.5
HDAC4-201ENST00000345617 GABRPO00591 440 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms