RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 SLC1A3P43003 542 aa23.1■■□□□ 1.29
TRADD-201ENST00000345057 TMED10P49755 219 aaKnown RBP23.1■■□□□ 1.29
TRADD-201ENST00000345057 TIGD6Q17RP2 521 aa23.1■■□□□ 1.29
TRADD-201ENST00000345057 CBLN3Q6UW01 205 aa23.1■■□□□ 1.29
TRADD-201ENST00000345057 ZNF517Q6ZMY9 492 aaPredicted RBP23.1■■□□□ 1.29
TRADD-201ENST00000345057 OR13C2Q8NGS9 318 aa23.1■■□□□ 1.29
TRADD-201ENST00000345057 H2AFY2Q9P0M6 372 aaPredicted RBP23.1■■□□□ 1.29
TRADD-201ENST00000345057 MYO15AQ9UKN7 3530 aa23.1■■□□□ 1.29
TRADD-201ENST00000345057 BHLHE40O14503 412 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 FADS1O60427 444 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 MAN1A2O60476 641 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 GABARAPO95166 117 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 ZNF117Q03924 483 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 NXNL2Q5VZ03 156 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 FAM198BQ6UWH4 519 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 ATG4DQ86TL0 474 aaPredicted RBP23.09■■□□□ 1.29
TRADD-201ENST00000345057 TMEM9BQ9NQ34 198 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 DIMT1Q9UNQ2 313 aaKnown RBP23.09■■□□□ 1.29
TRADD-201ENST00000345057 LOXL2Q9Y4K0 774 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 GDF9O60383 454 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 RAB36O95755 333 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 CH25HO95992 272 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 CBFBQ13951 182 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 NUP54Q7Z3B4 507 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 MARCH3Q86UD3 253 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 GID4Q8IVV7 300 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 ZFAND2BQ8WV99 257 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 IFT27Q9BW83 186 aa23.09■■□□□ 1.29
TRADD-201ENST00000345057 ZBTB20Q9HC78 741 aaPredicted RBP23.09■■□□□ 1.29
TRADD-201ENST00000345057 ATE1O95260 518 aa23.08■■□□□ 1.29
TRADD-201ENST00000345057 MTNR1AP48039 350 aa23.08■■□□□ 1.29
TRADD-201ENST00000345057 FXYD6P3P58550 94 aa23.08■■□□□ 1.29
TRADD-201ENST00000345057 OR5W2Q8NH69 310 aa23.08■■□□□ 1.29
TRADD-201ENST00000345057 EDEM2Q9BV94 578 aa23.08■■□□□ 1.29
TRADD-201ENST00000345057 MND1Q9BWT6 205 aa23.08■■□□□ 1.29
TRADD-201ENST00000345057 GPR52Q9Y2T5 361 aa23.08■■□□□ 1.29
TRADD-201ENST00000345057 SLC22A1O15245 554 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 OIP5O43482 229 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 CDC40O60508 579 aaKnown RBP eCLIP23.07■■□□□ 1.28
TRADD-201ENST00000345057 IGHEP01854 428 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 P2RX1P51575 399 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 CDH11P55287 796 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 AADACL4Q5VUY2 407 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 BCDIN3DQ7Z5W3 292 aaKnown RBP23.07■■□□□ 1.28
TRADD-201ENST00000345057 SLC22A8Q8TCC7 542 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 TTC9Q92623 222 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 AKIRIN1Q9H9L7 192 aaPredicted RBP23.07■■□□□ 1.28
TRADD-201ENST00000345057 LIN28AQ9H9Z2 209 aaKnown RBP23.07■■□□□ 1.28
TRADD-201ENST00000345057 CMC2Q9NRP2 79 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 CHCHD3Q9NX63 227 aaKnown RBP23.07■■□□□ 1.28
TRADD-201ENST00000345057 IL20RAQ9UHF4 553 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 PTRH2Q9Y3E5 179 aaKnown RBP23.07■■□□□ 1.28
TRADD-201ENST00000345057 ZNF337Q9Y3M9 751 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 NDUFB2O95178 105 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 PTHP01270 115 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 CD36P16671 472 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 ITPKBP27987 946 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 SF3A2Q15428 464 aaKnown RBP23.07■■□□□ 1.28
TRADD-201ENST00000345057 FAM199XQ6PEV8 388 aaPredicted RBP23.07■■□□□ 1.28
TRADD-201ENST00000345057 SLC16A12Q6ZSM3 486 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 OR2Y1Q8NGV0 311 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 OR51A7Q8NH64 312 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 RNFT2Q96EX2 444 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 SH3YL1Q96HL8 342 aaPredicted RBP23.07■■□□□ 1.28
TRADD-201ENST00000345057 ADAM19Q9H013 955 aa23.07■■□□□ 1.28
TRADD-201ENST00000345057 FGF20Q9NP95 211 aaPredicted RBP23.07■■□□□ 1.28
TRADD-201ENST00000345057 TRAV27A0A087WT01 109 aa23.06■■□□□ 1.28
TRADD-201ENST00000345057 CBFA2T3O75081 653 aa23.06■■□□□ 1.28
TRADD-201ENST00000345057 MYL12AP19105 171 aa23.06■■□□□ 1.28
TRADD-201ENST00000345057 FUT1P19526 365 aa23.06■■□□□ 1.28
TRADD-201ENST00000345057 NFATC3Q12968 1075 aa23.06■■□□□ 1.28
TRADD-201ENST00000345057 C1DQ13901 141 aaKnown RBP23.06■■□□□ 1.28
TRADD-201ENST00000345057 EXT1Q16394 746 aa23.06■■□□□ 1.28
TRADD-201ENST00000345057 C3orf38Q5JPI3 329 aa23.06■■□□□ 1.28
TRADD-201ENST00000345057 ARHGAP11AQ6P4F7 1023 aa23.06■■□□□ 1.28
TRADD-201ENST00000345057 CXXC5Q7LFL8 322 aaKnown RBP23.06■■□□□ 1.28
TRADD-201ENST00000345057 PROKR2Q8NFJ6 384 aa23.06■■□□□ 1.28
TRADD-201ENST00000345057 C8orf44Q96CB5 159 aa23.06■■□□□ 1.28
TRADD-201ENST00000345057 PCDHGB6Q9Y5F9 930 aa23.06■■□□□ 1.28
TRADD-201ENST00000345057 RIIAD1A6NNX1 92 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 GNB5O14775 395 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 OR7A10O76100 309 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 IFNGP01579 166 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 HTR1FP30939 366 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 MLLT10P55197 1068 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 TMED1Q13445 227 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 ANKDD1AQ495B1 522 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 ARMC4Q5T2S8 1044 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 DESI1Q6ICB0 168 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 RAB11FIP2Q7L804 512 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 SLC15A4Q8N697 577 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 GALNT6Q8NCL4 622 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 OR52I1Q8NGK6 324 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 LIPHQ8WWY8 451 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 LIN37Q96GY3 246 aaPredicted RBP23.05■■□□□ 1.28
TRADD-201ENST00000345057 TAAR9Q96RI9 348 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 TNFRSF13CQ96RJ3 184 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 DDA1Q9BW61 102 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 DEFB126Q9BYW3 111 aa23.05■■□□□ 1.28
TRADD-201ENST00000345057 ZNF700Q9H0M5 742 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms