RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 OR5M1Q8NGP8 315 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 ZPLD1Q8TCW7 415 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 DNAJA4Q8WW22 397 aaPredicted RBP10.69□□□□□ -0.7
SNCA-202ENST00000345009 POP5Q969H6 163 aaKnown RBP10.69□□□□□ -0.7
SNCA-202ENST00000345009 FAM162AQ96A26 154 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 TAMM41Q96BW9 452 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 WDYHV1Q96HA8 205 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 VKORC1Q9BQB6 163 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 ZNF559Q9BR84 538 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 PRDM14Q9GZV8 571 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 PNPLA3Q9NST1 481 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 TNFRSF10DQ9UBN6 386 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 TESQ9UGI8 421 aaKnown RBP10.69□□□□□ -0.7
SNCA-202ENST00000345009 MAGEL2Q9UJ55 1249 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 SH3BGRL2Q9UJC5 107 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 RPS6KA6Q9UK32 745 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 HRH3Q9Y5N1 445 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 PCNX1Q96RV3 2341 aa10.69□□□□□ -0.7
SNCA-202ENST00000345009 LRRK2Q5S007 2527 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 UBR5O95071 2799 aaPredicted RBP10.68□□□□□ -0.7
SNCA-202ENST00000345009 AP3D1O14617 1153 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 LRRTM2O43300 516 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 TPST1O60507 370 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 FMO6PO60774 539 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 LGI1O95970 557 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 OPN1SWP03999 348 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 FESP07332 822 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 ZNF708P17019 499 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 CPOXP36551 454 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 ACAA2P42765 397 aaKnown RBP10.68□□□□□ -0.7
SNCA-202ENST00000345009 STARP49675 285 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 CLK1P49759 484 aaKnown RBP10.68□□□□□ -0.7
SNCA-202ENST00000345009 LHX2P50458 406 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 POLR2HP52434 150 aaKnown RBP10.68□□□□□ -0.7
SNCA-202ENST00000345009 SMSP52788 366 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 DLX5P56178 289 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 SELENOWP63302 87 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 BNIP2Q12982 314 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 TOMM34Q15785 309 aaPredicted RBP10.68□□□□□ -0.7
SNCA-202ENST00000345009 SGCBQ16585 318 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 DUSP7Q16829 419 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 C1QL3Q5VWW1 255 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 GLYATQ6IB77 296 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 C3orf33Q6P1S2 294 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 B3GNT6Q6ZMB0 384 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 ESPNLQ6ZVH7 1005 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 PLEKHM3Q6ZWE6 761 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 ULK2Q8IYT8 1036 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 UBQLNLQ8IYU4 475 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 RNF148Q8N7C7 305 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 SMPDL3BQ92485 455 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 TPD52L3Q96J77 140 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 CALHM2Q9HA72 323 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 TAS2R1Q9NYW7 299 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 TINAGQ9UJW2 476 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 SH3GLB1Q9Y371 365 aa10.68□□□□□ -0.7
SNCA-202ENST00000345009 SPTBN1Q01082 2364 aaKnown RBP10.67□□□□□ -0.7
SNCA-202ENST00000345009 SHISA8B8ZZ34 492 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 EBAG9O00559 213 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 EIF1AYO14602 144 aaKnown RBP10.67□□□□□ -0.7
SNCA-202ENST00000345009 ADAMDEC1O15204 470 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 SEC14L5O43304 696 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 BCAS1O75363 584 aaPredicted RBP10.67□□□□□ -0.7
SNCA-202ENST00000345009 GCM2O75603 506 aaPredicted RBP10.67□□□□□ -0.7
SNCA-202ENST00000345009 AGFG2O95081 481 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 SYNGR4O95473 234 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 NTN1O95631 604 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 ZNF682O95780 498 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 PNMTP11086 282 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 GGT1P19440 569 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 TCN1P20061 433 aaPredicted RBP10.67□□□□□ -0.7
SNCA-202ENST00000345009 PSMA4P25789 261 aaKnown RBP10.67□□□□□ -0.7
SNCA-202ENST00000345009 TACR3P29371 465 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 CLDN18P56856 261 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 CARD18P57730 90 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 BNIP1Q12981 228 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 TMEM176BQ3YBM2 270 aaPredicted RBP10.67□□□□□ -0.7
SNCA-202ENST00000345009 C1orf185Q5T7R7 199 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 GTF2IRD2BQ6EKJ0 949 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 ULK3Q6PHR2 472 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 POMZP3Q6PJE2 187 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 RINLQ6ZS11 566 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 FKBP9P1Q75LS8 142 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 GTF2IRD2Q86UP8 949 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 FJX1Q86VR8 437 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 LSMEM1Q8N8F7 131 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 ATP6V1C2Q8NEY4 427 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 PHF10Q8WUB8 498 aaKnown RBP10.67□□□□□ -0.7
SNCA-202ENST00000345009 DDIT4LQ96D03 193 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 KLHL15Q96M94 604 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 BTBD10Q9BSF8 475 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 ADAM19Q9H013 955 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 MUC13Q9H3R2 512 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 GORASP2Q9H8Y8 452 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 CHRNA9Q9UGM1 479 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 CD300AQ9UGN4 299 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 EGFL7Q9UHF1 273 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 USP22Q9UPT9 525 aa10.67□□□□□ -0.7
SNCA-202ENST00000345009 SAMD4AQ9UPU9 718 aaKnown RBP10.67□□□□□ -0.7
SNCA-202ENST00000345009 MEMO1Q9Y316 297 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms