RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 OR51T1Q8NGJ9 327 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 CREB3L4Q8TEY5 395 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 ST8SIA2Q92186 375 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 INTS14Q96SY0 518 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 FZD3Q9NPG1 666 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 COL14A1Q05707 1796 aaKnown RBP16.91■□□□□ 0.3
SMC4-201ENST00000344722 ELK1P19419 428 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 SUOXP51687 545 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 PLA2G7Q13093 441 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 CCDC190Q86UF4 302 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 VRK2Q86Y07 508 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 GMLQ99445 158 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 SRRQ9GZT4 340 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 IFT22Q9H7X7 185 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 A4GALTQ9NPC4 353 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 SOD2P04179 222 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 CTSOP43234 321 aaPredicted RBP16.91■□□□□ 0.3
SMC4-201ENST00000344722 OR4Q3Q8NH05 313 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 TLR9Q9NR96 1032 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 FAM86C1Q9NVL1 165 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 SLC35A3Q9Y2D2 325 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 HOXC5Q00444 222 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 SBSNQ6UWP8 590 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 TMEM207Q6UWW9 146 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 TEPSINQ96N21 525 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 OR7D2Q96RA2 312 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 SMIM3Q9BZL3 60 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 TRAV27A0A087WT01 109 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 MPIG6BO95866 241 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 ADH1BP00325 375 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 S100A8P05109 93 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 FIBINQ8TAL6 211 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 BMFQ96LC9 184 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 C12orf57Q99622 126 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 SLIRPQ9GZT3 109 aaKnown RBP16.9■□□□□ 0.3
SMC4-201ENST00000344722 C19orf12Q9NSK7 152 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 SLC6A14Q9UN76 642 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 IMPA2O14732 288 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 PRICKLE3O43900 615 aaPredicted RBP16.9■□□□□ 0.3
SMC4-201ENST00000344722 OR2T7P0C7T2 308 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 UBE2KP61086 200 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 XAF1Q6GPH4 301 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 BTLAQ7Z6A9 289 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 OR2T27Q8NH04 317 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 HAS2Q92819 552 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 SYT17Q9BSW7 474 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 B3GALT1Q9Y5Z6 326 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 CRTAPO75718 401 aaPredicted RBP16.9■□□□□ 0.3
SMC4-201ENST00000344722 CRABP1P29762 137 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 TMEM225Q6GV28 225 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 H3F3CQ6NXT2 135 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 LPCAT3Q6P1A2 487 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 TEX261Q6UWH6 196 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 BCDIN3DQ7Z5W3 292 aaKnown RBP16.9■□□□□ 0.3
SMC4-201ENST00000344722 ISYNA1Q9NPH2 558 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 SPHK2Q9NRA0 654 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 FBXL12Q9NXK8 326 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 U3KQ87 197 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 FBXO24O75426 580 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 HSF5Q4G112 596 aaPredicted RBP16.9■□□□□ 0.3
SMC4-201ENST00000344722 UNQ6126/PRO20091Q6UXV3 157 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 SERINC2Q96SA4 455 aa16.9■□□□□ 0.3
SMC4-201ENST00000344722 RGPD2P0DJD1 1756 aa16.89■□□□□ 0.3
SMC4-201ENST00000344722 ARNTP27540 789 aa16.89■□□□□ 0.3
SMC4-201ENST00000344722 TLE3Q04726 772 aa16.89■□□□□ 0.3
SMC4-201ENST00000344722 PDZK1IP1Q13113 114 aa16.89■□□□□ 0.3
SMC4-201ENST00000344722 CAMK2DQ13557 499 aa16.89■□□□□ 0.3
SMC4-201ENST00000344722 C6orf132Q5T0Z8 1188 aa16.89■□□□□ 0.3
SMC4-201ENST00000344722 MBOAT2Q6ZWT7 520 aa16.89■□□□□ 0.3
SMC4-201ENST00000344722 NINJ1Q92982 152 aa16.89■□□□□ 0.3
SMC4-201ENST00000344722 GPR62Q9BZJ7 368 aa16.89■□□□□ 0.3
SMC4-201ENST00000344722 METTL7AQ9H8H3 244 aa16.89■□□□□ 0.3
SMC4-201ENST00000344722 LTB4R2Q9NPC1 389 aa16.89■□□□□ 0.3
SMC4-201ENST00000344722 UFSP2Q9NUQ7 469 aa16.89■□□□□ 0.3
SMC4-201ENST00000344722 RPH3AQ9Y2J0 694 aaPredicted RBP16.89■□□□□ 0.3
SMC4-201ENST00000344722 B4DGG1 531 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 ONECUT3O60422 494 aaPredicted RBP16.89■□□□□ 0.29
SMC4-201ENST00000344722 KCNK2O95069 426 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 RNH1P13489 461 aaKnown RBP16.89■□□□□ 0.29
SMC4-201ENST00000344722 XCR1P46094 333 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 NNATQ16517 81 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 LCN10Q6JVE6 187 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 LILRB2Q8N423 598 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 CDS1Q92903 461 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 TGM7Q96PF1 710 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 SMG9Q9H0W8 520 aaKnown RBP16.89■□□□□ 0.29
SMC4-201ENST00000344722 MTHFD2P13995 350 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 GABRB1P18505 474 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 SEMA3BQ13214 749 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 TEAD2Q15562 447 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 OR1Q1Q15612 314 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 SGCAQ16586 387 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 ACTBL2Q562R1 376 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 TMEM244Q5VVB8 128 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 ST6GALNAC5Q9BVH7 336 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 HCAR1Q9BXC0 346 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 ZNF442Q9H7R0 627 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 SLCO3A1Q9UIG8 710 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 A8MVJ9 347 aa16.89■□□□□ 0.29
SMC4-201ENST00000344722 K7EPK0 472 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms