RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 CSNK2A1P68400 391 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-201ENST00000344376 SQLEQ14534 574 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 GTDC1Q4AE62 458 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 SLC2A7Q6PXP3 512 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 ZNF771Q7L3S4 317 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-201ENST00000344376 ABHD3Q8WU67 409 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 CNOT9Q92600 299 aaKnown RBP14.35□□□□□ -0.11
ATG4B-201ENST00000344376 NRGNQ92686 78 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 GTF2H4Q92759 462 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 NINJ1Q92982 152 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 ZNF524Q96C55 264 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 AURKBQ96GD4 344 aaPredicted RBP14.35□□□□□ -0.11
ATG4B-201ENST00000344376 KLHL4Q9C0H6 718 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 CCDC167Q9P0B6 97 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 KLHL9Q9P2J3 617 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 KLHL13Q9P2N7 655 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 CHRNA9Q9UGM1 479 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 A0A096LPI6 279 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 CLDN24A6NM45 220 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 BCAS1O75363 584 aaPredicted RBP14.34□□□□□ -0.11
ATG4B-201ENST00000344376 BCHEP06276 602 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 TFPIP10646 304 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 ENPP1P22413 925 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 FADDQ13158 208 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 LIN52Q52LA3 116 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 SYT14P1Q58G82 188 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 BLOC1S3Q6QNY0 202 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 BEND4Q6ZU67 534 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 ZNF440Q8IYI8 595 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 STON2Q8WXE9 905 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 SPDL1Q96EA4 605 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 CCDC106Q9BWC9 280 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 PAIP1Q9H074 479 aaKnown RBP14.34□□□□□ -0.11
ATG4B-201ENST00000344376 RABEP2Q9H5N1 569 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 C12orf49Q9H741 205 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 KLHL28Q9NXS3 571 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 PCDHB14Q9Y5E9 798 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 CCDC168Q8NDH2 2452 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 CFAP73A6NFT4 308 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 SULT2B1O00204 365 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 CLIC1O00299 241 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 PPP3CBP16298 524 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 DNASE1P24855 282 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 CCKARP32238 428 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 IDH2P48735 452 aaKnown RBP14.34□□□□□ -0.11
ATG4B-201ENST00000344376 LARS2Q15031 903 aaKnown RBP14.34□□□□□ -0.11
ATG4B-201ENST00000344376 ZSWIM7Q19AV6 140 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 MRPL2Q5T653 305 aaKnown RBP14.34□□□□□ -0.11
ATG4B-201ENST00000344376 OR52P1PQ8NH57 321 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 SLC38A5Q8WUX1 472 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 ZHX1-C8orf76Q96EF9 292 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 WFIKKN1Q96NZ8 548 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 SIKE1Q9BRV8 207 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 ARMC7Q9H6L4 198 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 CTPS2Q9NRF8 586 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 ST6GALNAC2Q9UJ37 374 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 TRIM33Q9UPN9 1127 aa14.34□□□□□ -0.11
ATG4B-201ENST00000344376 C5orf58C9J3I9 102 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 FAAHO00519 579 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 HRGP04196 525 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 YES1P07947 543 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 TFPTP0C1Z6 253 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 PPIBP23284 216 aaKnown RBP14.33□□□□□ -0.12
ATG4B-201ENST00000344376 CLK1P49759 484 aaKnown RBP14.33□□□□□ -0.12
ATG4B-201ENST00000344376 DIO1P49895 249 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 POU4F3Q15319 338 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 RGNQ15493 299 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 AGKQ53H12 422 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 TMPPEQ6ZT21 453 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 FUNDC1Q8IVP5 155 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 TUSC5Q8IXB3 177 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 TMEM19Q96HH6 336 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 ZNF232Q9UNY5 417 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 DSPPQ9NZW4 1301 aa14.33□□□□□ -0.12
ATG4B-201ENST00000344376 IGHV3-15A0A0B4J1V0 119 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 A0A0G2JPF8 293 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 HNRNPCL2B2RXH8 293 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 HNRNPCL3B7ZW38 293 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 AP3D1O14617 1153 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 HNRNPCL1O60812 293 aaKnown RBP14.32□□□□□ -0.12
ATG4B-201ENST00000344376 FESP07332 822 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 HNRNPCL4P0DMR1 293 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 CD1EP15812 388 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 POLR2HP52434 150 aaKnown RBP14.32□□□□□ -0.12
ATG4B-201ENST00000344376 ART1P52961 327 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 PLAURQ03405 335 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 RASGEF1BQ0VAM2 473 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 MAPK11Q15759 364 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 LRIF1Q5T3J3 769 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 PRAMEF8Q5VWM4 474 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 PRAMEF7Q5VXH5 474 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 BCO1Q9HAY6 547 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 A4GALTQ9NPC4 353 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 CORO2BQ9UQ03 480 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 ZNF443Q9Y2A4 671 aaPredicted RBP14.32□□□□□ -0.12
ATG4B-201ENST00000344376 IFT52Q9Y366 437 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 HDGFL3Q9Y3E1 203 aa14.32□□□□□ -0.12
ATG4B-201ENST00000344376 CDHR4A6H8M9 788 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 CYTIPO60759 359 aa14.31□□□□□ -0.12
ATG4B-201ENST00000344376 EDF1O60869 148 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms